RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 IL18RAPO95256 599 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 GPD1P21695 349 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 PWP1Q13610 501 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 FAM161BQ96MY7 647 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 WDR24Q96S15 920 aa12.74□□□□□ -0.37
SPG11-201ENST00000261866 KLRC1P26715 233 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 ORC2Q13416 577 aaPredicted RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 TMED8Q6PL24 325 aaPredicted RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 RCOR2Q8IZ40 523 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 FSCBQ5H9T9 825 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 SPATS2Q86XZ4 545 aaKnown RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 BLOC1S5Q8TDH9 187 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPG11-201ENST00000261866 ZNF212Q9UDV6 495 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 ARIH2O95376 493 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 SOAT1P35610 550 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 KCNJ1P48048 391 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 EFEMP1Q12805 493 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 ANKS3Q6ZW76 656 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 C7orf25Q9BPX7 421 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 RUBCNLQ9H714 662 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 PRMT7Q9NVM4 692 aaPredicted RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 TSPAN3O60637 253 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 DGKIO75912 1065 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 BEX3Q00994 111 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 CTXN3Q4LDR2 81 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 DENND5BQ6ZUT9 1274 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 TRIM48Q8IWZ4 208 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 SGF29Q96ES7 293 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 FOPNLQ96NB1 174 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 RPRD1AQ96P16 312 aaPredicted RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 SLITRK1Q96PX8 696 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 TRIM62Q9BVG3 475 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 CELF4Q9BZC1 486 aaKnown RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 CACNA2D2Q9NY47 1150 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 IGSF9BQ9UPX0 1349 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 CKMP06732 381 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 PDHA1P08559 390 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 TAP1Q03518 808 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 RIMS1Q86UR5 1692 aaKnown RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 A0A087WZ62 844 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 ZNF197O14709 1029 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 ZNF263O14978 683 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 SGPL1O95470 568 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 CDC42EP1Q00587 391 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 KDSRQ06136 332 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPG11-201ENST00000261866 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 ARHGAP18Q8N392 663 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 TTC39CQ8N584 583 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 TMA16Q96EY4 203 aaKnown RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 ZMAT2Q96NC0 199 aaKnown RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 FDXACB1Q9BRP7 624 aaPredicted RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 DDIT4Q9NX09 232 aa12.73□□□□□ -0.37
SPG11-201ENST00000261866 ZC3H7BQ9UGR2 993 aaKnown RBP12.73□□□□□ -0.37
SPG11-201ENST00000261866 E9PCH4 1651 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 GPR182O15218 404 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 ENO1P06733 434 aaKnown RBP12.72□□□□□ -0.37
SPG11-201ENST00000261866 TCN1P20061 433 aaPredicted RBP12.72□□□□□ -0.37
SPG11-201ENST00000261866 ARFIP2P53365 341 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 FBXO32Q969P5 355 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 WDCPQ9H6R7 721 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 PCDHGB4Q9UN71 923 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 POLR1AO95602 1720 aaPredicted RBP12.72□□□□□ -0.37
SPG11-201ENST00000261866 SCAMP3O14828 347 aaKnown RBP12.72□□□□□ -0.37
SPG11-201ENST00000261866 PCSK1P29120 753 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 AARSP49588 968 aaKnown RBP eCLIP12.72□□□□□ -0.37
SPG11-201ENST00000261866 LRRC23Q53EV4 343 aaPredicted RBP12.72□□□□□ -0.37
SPG11-201ENST00000261866 RRM2BQ7LG56 351 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 ERO1BQ86YB8 467 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 PNKPQ96T60 521 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 CENPKQ9BS16 269 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 COLEC11Q9BWP8 271 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 ING2Q9H160 280 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 PCDHB8Q9UN66 801 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 RRN3P2A6NIE6 340 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 TBC1D12O60347 775 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 WBP4O75554 376 aaKnown RBP12.72□□□□□ -0.37
SPG11-201ENST00000261866 COMTP21964 271 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 EPHB2P29323 1055 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 PRAMEF19Q5SWL8 479 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 ARMC6Q6NXE6 501 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 CBWD2Q8IUF1 395 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 ADSSL1Q8N142 457 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 SIX5Q8N196 739 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 UNKQ9C0B0 810 aaKnown RBP12.72□□□□□ -0.37
SPG11-201ENST00000261866 SNTG2Q9NY99 539 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 ANGPTL2Q9UKU9 493 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 USP31Q70CQ4 1352 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 DGKZQ13574 1117 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 TMEM39AQ9NV64 488 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 PJA2O43164 708 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 CTDNEP1O95476 244 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 ESRRGP62508 458 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 RD3Q7Z3Z2 195 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 TMC7Q7Z402 723 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 TRIML2Q8N7C3 387 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 BPIFA3Q9BQP9 254 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms