RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 LTBRP36941 435 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 MARSP56192 900 aaKnown RBP20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 PPP3CAQ08209 521 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 SMARCB1Q12824 385 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 UVSSAQ2YD98 709 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 WDR44Q5JSH3 913 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 C1orf220Q5T0J3 134 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 DCP1BQ8IZD4 617 aaKnown RBP20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 ADGRF2Q8IZF7 708 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 PDCL2Q8N4E4 241 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 SNX25Q9H3E2 840 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 CLEC1BQ9P126 229 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 NXF1Q9UBU9 619 aaKnown RBP20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 C2orf16Q68DN1 1984 aa20.1■□□□□ 0.81
CYSTM1-201ENST00000261811 H3BQ06 376 aaPredicted RBP20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 ROR1Q01973 937 aa20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 LILRA6Q6PI73 481 aa20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 CYP26C1Q6V0L0 522 aa20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 VN1R2Q8NFZ6 395 aa20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 SLC35C1Q96A29 364 aa20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 PRDM6Q9NQX0 595 aa20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 ZDHHC7Q9NXF8 308 aa20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 DDX43Q9NXZ2 648 aaKnown RBP20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 L1RE1Q9UN81 338 aa20.09■□□□□ 0.81
CYSTM1-201ENST00000261811 PRRG1O14668 218 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 TACC1O75410 805 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 VNN1O95497 513 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 SPATA31D3P0C874 917 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 PRKCSHP14314 528 aaPredicted RBP20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 ATF2P15336 505 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 DLX2Q07687 328 aaPredicted RBP20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 GPR17Q13304 367 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 SMAD4Q13485 552 aaKnown RBP20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 SOWAHAQ2M3V2 549 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 SPATA31D4Q6ZUB0 917 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 ENOX1Q8TC92 643 aaKnown RBP20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 FAXDC2Q96IV6 333 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 MSLNLQ96KJ4 702 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 CNOT6LQ96LI5 555 aaKnown RBP20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 ACBD6Q9BR61 282 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 XYLT2Q9H1B5 865 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 RAB20Q9NX57 234 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 AFF4Q9UHB7 1163 aaKnown RBP20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 FBXW11Q9UKB1 542 aa20.08■□□□□ 0.81
CYSTM1-201ENST00000261811 TCF20Q9UGU0 1960 aaKnown RBP20.08■□□□□ 0.8
CYSTM1-201ENST00000261811 EYSQ5T1H1 3165 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 WDR27A2RRH5 827 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 P4HA2O15460 535 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 ADAM12O43184 909 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 ABLIM3O94929 683 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 ASS1P00966 412 aaKnown RBP20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 WARSP23381 471 aaKnown RBP20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 MTIF2P46199 727 aaKnown RBP20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 FMO5P49326 533 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 RBM10P98175 930 aaKnown RBP20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 TYRO3Q06418 890 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 PPM1LQ5SGD2 360 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 PTCRAQ6ISU1 281 aaPredicted RBP20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 RSPO2Q6UXX9 243 aaPredicted RBP20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 TRIM59Q8IWR1 403 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 TAS1R2Q8TE23 839 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 C2orf15Q8WU43 125 aaKnown RBP20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 RIPOR3Q96MK2 946 aa20.07■□□□□ 0.8
CYSTM1-201ENST00000261811 PMM2O15305 246 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 XYLBO75191 536 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 ZMYND10O75800 440 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 AFPP02771 609 aaKnown RBP20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 C8AP07357 584 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 TPM2P07951 284 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 HNRNPA1P09651 372 aaKnown RBP eCLIP20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 GNL1P36915 607 aaPredicted RBP20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 MTHFRP42898 656 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 NOP14P78316 857 aaKnown RBP20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 TFF2Q03403 129 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 KCNH2Q12809 1159 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 MAPRE1Q15691 268 aaKnown RBP20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 CLUL1Q15846 466 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 NFE2Q16621 373 aaPredicted RBP20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 ATAT1Q5SQI0 421 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 RARS2Q5T160 578 aaKnown RBP20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 TTC39CQ8N584 583 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 SMRP1Q8NCR6 262 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 ANKRD20A12PQ8NF67 263 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 CMASQ8NFW8 434 aaPredicted RBP20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 OR6B3Q8NGW1 331 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 NECTIN4Q96NY8 510 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 ASB2Q96Q27 587 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 ZCWPW1Q9H0M4 648 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 ADAM7Q9H2U9 754 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 PIDD1Q9HB75 910 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 CYP4F11Q9HBI6 524 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 CDH9Q9ULB4 789 aa20.06■□□□□ 0.8
CYSTM1-201ENST00000261811 CCDC195A0A1B0GUA6 201 aa20.05■□□□□ 0.8
CYSTM1-201ENST00000261811 GABRDO14764 452 aa20.05■□□□□ 0.8
CYSTM1-201ENST00000261811 LRG1P02750 347 aa20.05■□□□□ 0.8
CYSTM1-201ENST00000261811 HOXA9P31269 272 aa20.05■□□□□ 0.8
CYSTM1-201ENST00000261811 ADCY1Q08828 1119 aa20.05■□□□□ 0.8
CYSTM1-201ENST00000261811 PLD1Q13393 1074 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms