RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 MKNK1Q9BUB5 465 aa18.24■□□□□ 0.51
CGREF1-201ENST00000260595 BRD9Q9H8M2 597 aa18.24■□□□□ 0.51
CGREF1-201ENST00000260595 PANK4Q9NVE7 773 aa18.24■□□□□ 0.51
CGREF1-201ENST00000260595 ANK1P16157 1881 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 KPNA7A9QM74 516 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 ARNTLO00327 626 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 GARTP22102 1010 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 GDI1P31150 447 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 MAGEA9P43362 315 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 ALCAMQ13740 583 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 SLC39A12Q504Y0 691 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 STXBP5Q5T5C0 1151 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 METTL23Q86XA0 190 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 MFSD6LQ8IWD5 586 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 PDILTQ8N807 584 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 CXorf38Q8TB03 319 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 IRF7Q92985 503 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 CBWD1Q9BRT8 395 aa18.23■□□□□ 0.51
CGREF1-201ENST00000260595 SPATA6Q9NWH7 488 aaPredicted RBP18.23■□□□□ 0.51
CGREF1-201ENST00000260595 CFAP54Q96N23 3096 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 SCN1AP35498 2009 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 TSC2P49815 1807 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 HEPACAM2A8MVW5 462 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 LDHAP00338 332 aaKnown RBP18.22■□□□□ 0.51
CGREF1-201ENST00000260595 LMNAP02545 664 aaKnown RBP18.22■□□□□ 0.51
CGREF1-201ENST00000260595 ATF6P18850 670 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 RPS9P46781 194 aaKnown RBP18.22■□□□□ 0.51
CGREF1-201ENST00000260595 TUFMP49411 452 aaKnown RBP18.22■□□□□ 0.51
CGREF1-201ENST00000260595 CDR1P51861 262 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 STK38Q15208 465 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 E2F4Q16254 413 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 ZNF528Q3MIS6 628 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 C1orf127Q8N9H9 656 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 E2F7Q96AV8 911 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 LPIN3Q9BQK8 851 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 TFIP11Q9UBB9 837 aaKnown RBP18.22■□□□□ 0.51
CGREF1-201ENST00000260595 FBXO4Q9UKT5 387 aa18.22■□□□□ 0.51
CGREF1-201ENST00000260595 MRPS17Q9Y2R5 130 aaKnown RBP18.22■□□□□ 0.51
CGREF1-201ENST00000260595 GOLGA8IPA6NC78 632 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 GOLGA8JA6NMD2 632 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 SPTLC2O15270 562 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 NCAM2O15394 837 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 LAMTOR5O43504 91 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 PPP6R2O75170 966 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 PRPF6O94906 941 aaKnown RBP18.21■□□□□ 0.51
CGREF1-201ENST00000260595 TFAMQ00059 246 aaKnown RBP18.21■□□□□ 0.51
CGREF1-201ENST00000260595 SV2CQ496J9 727 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 ARID3BQ8IVW6 561 aaPredicted RBP18.21■□□□□ 0.51
CGREF1-201ENST00000260595 SYCP3Q8IZU3 236 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 THEM5Q8N1Q8 247 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 GLIS3Q8NEA6 775 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 C2orf15Q8WU43 125 aaKnown RBP18.21■□□□□ 0.51
CGREF1-201ENST00000260595 SNX21Q969T3 373 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 FAM84AQ96KN4 292 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 LRRC3BQ96PB8 259 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 SEPT5Q99719 369 aaPredicted RBP18.21■□□□□ 0.51
CGREF1-201ENST00000260595 SLITRK6Q9H5Y7 841 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 TMEM206Q9H813 350 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 IL21Q9HBE4 155 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 KBTBD4Q9NVX7 518 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 RBAKQ9NYW8 714 aaPredicted RBP18.21■□□□□ 0.51
CGREF1-201ENST00000260595 AGAP1Q9UPQ3 857 aa18.21■□□□□ 0.51
CGREF1-201ENST00000260595 COL4A2P08572 1712 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 PTPRZ1P23471 2315 aaPredicted RBP18.2■□□□□ 0.5
CGREF1-201ENST00000260595 MAN2B1O00754 1011 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 ZNF263O14978 683 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 EXTL3O43909 919 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 ITGB3P05106 788 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 HAPLN1P10915 354 aaPredicted RBP18.2■□□□□ 0.5
CGREF1-201ENST00000260595 GABRR2P28476 465 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 POLR2BP30876 1174 aaKnown RBP18.2■□□□□ 0.5
CGREF1-201ENST00000260595 PNPLA4P41247 253 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 FCHO2Q0JRZ9 810 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 SMARCB1Q12824 385 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 MGAT5BQ3V5L5 792 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 ZC3H14Q6PJT7 736 aaKnown RBP18.2■□□□□ 0.5
CGREF1-201ENST00000260595 ITIH5Q86UX2 942 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 GPIHBP1Q8IV16 184 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 CCDC65Q8IXS2 484 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 SPPL2BQ8TCT7 592 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 HPS3Q969F9 1004 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 ZNF560Q96MR9 790 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 TNMDQ9H2S6 317 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 ATXN3LQ9H3M9 355 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 PCIF1Q9H4Z3 704 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 TMLHEQ9NVH6 421 aa18.2■□□□□ 0.5
CGREF1-201ENST00000260595 CACNA1IQ9P0X4 2223 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 YEATS4O95619 227 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 FGF19O95750 216 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 HOXD13P35453 343 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 MLLT6P55198 1093 aaPredicted RBP18.19■□□□□ 0.5
CGREF1-201ENST00000260595 GPR158Q5T848 1215 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 RIF1Q5UIP0 2472 aaKnown RBP18.19■□□□□ 0.5
CGREF1-201ENST00000260595 SHC4Q6S5L8 630 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 PDCL2Q8N4E4 241 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 LRRC52Q8N7C0 313 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 KCNG4Q8TDN1 519 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 CACTINQ8WUQ7 758 aaKnown RBP18.19■□□□□ 0.5
CGREF1-201ENST00000260595 FAM3CQ92520 227 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 NELL1Q92832 810 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms