RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 IFNA14P01570 189 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 RXRGP48443 463 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 CCR3P51677 355 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 CSNK2BP67870 215 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 APBA1Q02410 837 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 DENND2CQ68D51 928 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 PPP1R18Q6NYC8 613 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 TRPM8Q7Z2W7 1104 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 PATL1Q86TB9 770 aaKnown RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 LRRC34Q8IZ02 419 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 TTC17Q96AE7 1141 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 CDCA5Q96FF9 252 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 CEP170P1Q96L14 293 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 TCEANC2Q96MN5 208 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 VPS35Q96QK1 796 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 EHD4Q9H223 541 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 TUT1Q9H6E5 874 aaKnown RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 CD209Q9NNX6 404 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 PALMDQ9NP74 551 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 ECHDC1Q9NTX5 307 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 SAMD15Q9P1V8 674 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 PPARGC1AQ9UBK2 798 aaKnown RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 VTI1BQ9UEU0 232 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 HPCAL4Q9UM19 191 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 MTF2Q9Y483 593 aaPredicted RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 PCDHGA11Q9Y5H2 935 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 CHD4Q14839 1912 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 SLC12A8A0AV02 714 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 MAGEA13PA6NCF6 341 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 RAD51BO15315 384 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 SLC7A4O43246 635 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 ECE2O60344 883 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 ADAM23O75077 832 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 LTA4HP09960 611 aaKnown RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 PRDX5P30044 214 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 SOX11P35716 441 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 PTPN9P43378 593 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 GSSP48637 474 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 PCYT1AP49585 367 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 CEBPZQ03701 1054 aaKnown RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 PPP6R3Q5H9R7 873 aaPredicted RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 PRPF38BQ5VTL8 546 aaKnown RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 E4F1Q66K89 784 aaPredicted RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 PALM2Q8IXS6 379 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 LMAN2LQ9H0V9 348 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 RUBCNLQ9H714 662 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 CAAP1Q9H8G2 361 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 ASNSD1Q9NWL6 643 aa11.3□□□□□ -0.6
GCM1-201ENST00000259803 PTBP2Q9UKA9 531 aaKnown RBP11.3□□□□□ -0.6
GCM1-201ENST00000259803 TRIM75PA6NK02 468 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 G3V3G9 751 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 XPO1O14980 1071 aaKnown RBP11.29□□□□□ -0.6
GCM1-201ENST00000259803 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 PABPC1P11940 636 aaKnown RBP11.29□□□□□ -0.6
GCM1-201ENST00000259803 CPA1P15085 419 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 NFE2Q16621 373 aaPredicted RBP11.29□□□□□ -0.6
GCM1-201ENST00000259803 PTGISQ16647 500 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 GEN1Q17RS7 908 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 ZNF423Q2M1K9 1284 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 DCAF8Q5TAQ9 597 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 PRR23CQ6ZRP0 262 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 RHOUQ7L0Q8 258 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 CCDC25Q86WR0 208 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 CROCCP3Q8IVE0 287 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 LILRB4Q8NHJ6 448 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 PMEPA1Q969W9 287 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 OLFM3Q96PB7 478 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 NOX5Q96PH1 765 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 CTRCQ99895 268 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 SELENOSQ9BQE4 189 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 SLC13A1Q9BZW2 595 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 OSBPL2Q9H1P3 480 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 IL25Q9H293 177 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 LARSQ9P2J5 1176 aaKnown RBP11.29□□□□□ -0.6
GCM1-201ENST00000259803 KLHL3Q9UH77 587 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 DACH1Q9UI36 760 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 ZBTB21Q9ULJ3 1066 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 MAPRE3Q9UPY8 281 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 LEMD3Q9Y2U8 911 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 VCLP18206 1134 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 ATP2B4P23634 1241 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 IST1P53990 364 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 NR5A1Q13285 461 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 SLC14A2Q15849 920 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 ZCWPW2Q504Y3 356 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 B3GNT6Q6ZMB0 384 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 USP50Q70EL3 339 aaPredicted RBP11.29□□□□□ -0.6
GCM1-201ENST00000259803 FBXO33Q7Z6M2 555 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 ZNF677Q86XU0 584 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 CERS5Q8N5B7 392 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 IL17RDQ8NFM7 739 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 ZNF274Q96GC6 653 aaPredicted RBP11.29□□□□□ -0.6
GCM1-201ENST00000259803 ART5Q96L15 291 aa11.29□□□□□ -0.6
GCM1-201ENST00000259803 LLPHQ9BRT6 129 aaKnown RBP11.29□□□□□ -0.6
GCM1-201ENST00000259803 ESYT1Q9BSJ8 1104 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms