RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 MED15Q96RN5 788 aa6.31□□□□□ -1.4
TRA2B-201ENST00000259043 RGS17Q9UGC6 210 aaPredicted RBP6.31□□□□□ -1.4
TRA2B-201ENST00000259043 POLR2AP24928 1970 aaKnown RBP6.31□□□□□ -1.4
TRA2B-201ENST00000259043 CDC42BPBQ9Y5S2 1711 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 SALL3Q9BXA9 1300 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 NT5C1B-RDH14C9J2C7 533 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 AGFG2O95081 481 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 ESRRBO95718 433 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 CLK3P49761 638 aaKnown RBP6.3□□□□□ -1.4
TRA2B-201ENST00000259043 FXR1P51114 621 aaKnown RBP eCLIP6.3□□□□□ -1.4
TRA2B-201ENST00000259043 GEN1Q17RS7 908 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 TMEM240Q5SV17 173 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 UTP14CQ5TAP6 766 aaKnown RBP6.3□□□□□ -1.4
TRA2B-201ENST00000259043 FOXR2Q6PJQ5 311 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 ZNF365Q70YC5 407 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 KLHL32Q96NJ5 620 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 PRDM13Q9H4Q3 707 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 SLC45A2Q9UMX9 530 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 CNTLNQ9NXG0 1405 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 NEURL4Q96JN8 1562 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 CEP170BQ9Y4F5 1589 aaPredicted RBP6.3□□□□□ -1.4
TRA2B-201ENST00000259043 ABCC1P33527 1531 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 ARHGAP5Q13017 1502 aa6.3□□□□□ -1.4
TRA2B-201ENST00000259043 CLTCQ00610 1675 aaKnown RBP6.3□□□□□ -1.4
TRA2B-201ENST00000259043 PREX2Q70Z35 1606 aa6.29□□□□□ -1.4
TRA2B-201ENST00000259043 RECQLP46063 649 aaPredicted RBP6.29□□□□□ -1.4
TRA2B-201ENST00000259043 SNAPC2Q13487 334 aa6.29□□□□□ -1.4
TRA2B-201ENST00000259043 PTPRKQ15262 1439 aa6.29□□□□□ -1.4
TRA2B-201ENST00000259043 TTC7BQ86TV6 843 aa6.29□□□□□ -1.4
TRA2B-201ENST00000259043 PRR18Q8N4B5 295 aa6.29□□□□□ -1.4
TRA2B-201ENST00000259043 TMIEQ8NEW7 156 aa6.29□□□□□ -1.4
TRA2B-201ENST00000259043 CAVIN3Q969G5 261 aa6.29□□□□□ -1.4
TRA2B-201ENST00000259043 LRRIQ1Q96JM4 1722 aa6.29□□□□□ -1.4
TRA2B-201ENST00000259043 VRK1Q99986 396 aaPredicted RBP6.29□□□□□ -1.4
TRA2B-201ENST00000259043 CTTNBP2NLQ9P2B4 639 aa6.29□□□□□ -1.4
TRA2B-201ENST00000259043 MTO1Q9Y2Z2 717 aaKnown RBP6.29□□□□□ -1.4
TRA2B-201ENST00000259043 A0A1W2PS29 197 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 F2RL2O00254 374 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 ERN1O75460 977 aaKnown RBP6.28□□□□□ -1.4
TRA2B-201ENST00000259043 MALP21145 153 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 MPP3Q13368 585 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 KHDC1Q4VXA5 237 aaKnown RBP6.28□□□□□ -1.4
TRA2B-201ENST00000259043 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.28□□□□□ -1.4
TRA2B-201ENST00000259043 GADL1Q6ZQY3 521 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 TMPRSS9Q7Z410 1059 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 GLCCI1Q86VQ1 547 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 LNX2Q8N448 690 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 SLC44A3Q8N4M1 653 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 CPA6Q8N4T0 437 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 LRIG1Q96JA1 1093 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 PACSIN1Q9BY11 444 aa6.28□□□□□ -1.4
TRA2B-201ENST00000259043 DNMT1P26358 1616 aaKnown RBP6.28□□□□□ -1.4
TRA2B-201ENST00000259043 VWDEQ8N2E2 1590 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 TROQ12816 1431 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-201ENST00000259043 CPS1P31327 1500 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 LRRC14BA6NHZ5 514 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 ZNF37AP17032 561 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-201ENST00000259043 PDCP20941 246 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 CCND1P24385 295 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 PLA2G5P39877 138 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 EXOSC10Q01780 885 aaKnown RBP6.27□□□□□ -1.41
TRA2B-201ENST00000259043 PRR16Q569H4 304 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 SP5Q6BEB4 398 aaPredicted RBP6.27□□□□□ -1.41
TRA2B-201ENST00000259043 Q6ZNX1 250 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 MIER2Q8N344 545 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 CHMP4CQ96CF2 233 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 TCF7L1Q9HCS4 588 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 TBCCD1Q9NVR7 557 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 TESQ9UGI8 421 aaKnown RBP6.27□□□□□ -1.41
TRA2B-201ENST00000259043 SHANK2Q9UPX8 1470 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 PLXNC1O60486 1568 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 SAMD9LQ8IVG5 1584 aa6.27□□□□□ -1.41
TRA2B-201ENST00000259043 RNF17Q9BXT8 1623 aaKnown RBP6.26□□□□□ -1.41
TRA2B-201ENST00000259043 PRSS29PA6NIE9 313 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 E9PLN8 166 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 INO80B-WBP1J3KQ70 363 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 KIAA0355O15063 1070 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 TOM1O60784 492 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 RPLP2P05387 115 aaKnown RBP6.26□□□□□ -1.41
TRA2B-201ENST00000259043 SLC4A10Q6U841 1118 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 SSH3Q8TE77 659 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 VKORC1Q9BQB6 163 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 INO80BQ9C086 356 aaPredicted RBP6.26□□□□□ -1.41
TRA2B-201ENST00000259043 METTL14Q9HCE5 456 aaKnown RBP6.26□□□□□ -1.41
TRA2B-201ENST00000259043 SIDT1Q9NXL6 827 aaKnown RBP6.26□□□□□ -1.41
TRA2B-201ENST00000259043 KCTD5Q9NXV2 234 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 CDYLQ9Y232 598 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 COX11Q9Y6N1 276 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 SYNMO15061 1565 aa6.26□□□□□ -1.41
TRA2B-201ENST00000259043 COL11A2P13942 1736 aaPredicted RBP6.25□□□□□ -1.41
TRA2B-201ENST00000259043 CDC42BPAQ5VT25 1732 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 PRAMEF33A0A0G2JMD5 474 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 PRAMEF10O60809 474 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 SUN1O94901 812 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 SNUPNO95149 360 aaKnown RBP6.25□□□□□ -1.41
TRA2B-201ENST00000259043 POU2F2P09086 479 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 KCNA2P16389 499 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 CCDC93Q567U6 631 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 FAM90A1Q86YD7 464 aa6.25□□□□□ -1.41
TRA2B-201ENST00000259043 COLGALT2Q8IYK4 626 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms