RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ZNF564Q8TBZ8 553 aaPredicted RBP20.11■□□□□ 0.81
TRIM47-201ENST00000254816 LPPQ93052 612 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 FAM105AQ9NUU6 356 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 AMFRQ9UKV5 643 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 PADI3Q9ULW8 664 aa20.11■□□□□ 0.81
TRIM47-201ENST00000254816 UBQLN1Q9UMX0 589 aaKnown RBP20.11■□□□□ 0.81
TRIM47-201ENST00000254816 MOXD2PA6NHM9 499 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 KCNK3O14649 394 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 CILPO75339 1184 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 P4HA1P13674 534 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 RNASE9P60153 205 aaKnown RBP20.1■□□□□ 0.81
TRIM47-201ENST00000254816 MYO1EQ12965 1108 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 MESDQ14696 234 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 C9orf57Q5W0N0 161 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 TRIM72Q6ZMU5 477 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 MON1BQ7L1V2 547 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 HDXQ7Z353 690 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 CPNE8Q86YQ8 564 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 SLC4A11Q8NBS3 891 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 SNX9Q9Y5X1 595 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 TLR3O15455 904 aaKnown RBP20.1■□□□□ 0.81
TRIM47-201ENST00000254816 ZMYND10O75800 440 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 STAU1O95793 577 aaKnown RBP20.1■□□□□ 0.81
TRIM47-201ENST00000254816 HADHBP55084 474 aaKnown RBP20.1■□□□□ 0.81
TRIM47-201ENST00000254816 TCEAL1Q15170 157 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 TRIM71Q2Q1W2 868 aaKnown RBP20.1■□□□□ 0.81
TRIM47-201ENST00000254816 XKR4Q5GH76 650 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 ZNF618Q5T7W0 954 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 MMS22LQ6ZRQ5 1243 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 C1orf131Q8NDD1 294 aaKnown RBP20.1■□□□□ 0.81
TRIM47-201ENST00000254816 ERVK-5Q9HDB9 667 aa20.1■□□□□ 0.81
TRIM47-201ENST00000254816 GPR182O15218 404 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 MGEA5O60502 916 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 LPIN1Q14693 890 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 CCDC181Q5TID7 509 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 CYP3A43Q9HB55 503 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 STARD7Q9NQZ5 370 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 ADAM22Q9P0K1 906 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 ALG6Q9Y672 507 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 PTGESO14684 152 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 KCNE1P15382 129 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 AFF1P51825 1210 aaKnown RBP20.09■□□□□ 0.81
TRIM47-201ENST00000254816 NDST1P52848 882 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 GYS2P54840 703 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 PRMT2P55345 433 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 WDR93Q6P2C0 686 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 TMEM176AQ96HP8 235 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 FAXDC2Q96IV6 333 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 TSEN34Q9BSV6 310 aaKnown RBP20.09■□□□□ 0.81
TRIM47-201ENST00000254816 TRIM7Q9C029 511 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.09■□□□□ 0.812e-7■■■■□ 20.1
TRIM47-201ENST00000254816 UNC93B1Q9H1C4 597 aa20.09■□□□□ 0.81
TRIM47-201ENST00000254816 MTA2O94776 668 aa20.08■□□□□ 0.81
TRIM47-201ENST00000254816 PTPN11Q06124 597 aaPredicted RBP20.08■□□□□ 0.81
TRIM47-201ENST00000254816 PAK2Q13177 524 aa20.08■□□□□ 0.81
TRIM47-201ENST00000254816 DENND1BQ6P3S1 775 aa20.08■□□□□ 0.81
TRIM47-201ENST00000254816 DPH6Q7L8W6 267 aa20.08■□□□□ 0.81
TRIM47-201ENST00000254816 WDTC1Q8N5D0 677 aa20.08■□□□□ 0.81
TRIM47-201ENST00000254816 HES6Q96HZ4 224 aa20.08■□□□□ 0.81
TRIM47-201ENST00000254816 HINFPQ9BQA5 517 aa20.08■□□□□ 0.81
TRIM47-201ENST00000254816 MRPL45Q9BRJ2 306 aaKnown RBP20.08■□□□□ 0.81
TRIM47-201ENST00000254816 CHST12Q9NRB3 414 aa20.08■□□□□ 0.81
TRIM47-201ENST00000254816 CACNG4Q9UBN1 327 aa20.08■□□□□ 0.81
TRIM47-201ENST00000254816 RPLP2P05387 115 aaKnown RBP20.07■□□□□ 0.8
TRIM47-201ENST00000254816 ITGA4P13612 1032 aa20.07■□□□□ 0.8
TRIM47-201ENST00000254816 MLH1P40692 756 aa20.07■□□□□ 0.8
TRIM47-201ENST00000254816 PTP4A2Q12974 167 aa20.07■□□□□ 0.8
TRIM47-201ENST00000254816 CASP8Q14790 479 aa20.07■□□□□ 0.8
TRIM47-201ENST00000254816 PIRO00625 290 aa20.07■□□□□ 0.8
TRIM47-201ENST00000254816 SPTLC1O15269 473 aa20.07■□□□□ 0.8
TRIM47-201ENST00000254816 GJB6O95452 261 aa20.07■□□□□ 0.8
TRIM47-201ENST00000254816 PHF13Q86YI8 300 aaPredicted RBP20.07■□□□□ 0.8
TRIM47-201ENST00000254816 GSPT2Q8IYD1 628 aaKnown RBP20.07■□□□□ 0.8
TRIM47-201ENST00000254816 UVRAGQ9P2Y5 699 aa20.07■□□□□ 0.8
TRIM47-201ENST00000254816 BARX2Q9UMQ3 279 aaPredicted RBP20.07■□□□□ 0.8
TRIM47-201ENST00000254816 PCDHGC3Q9UN70 934 aa20.07■□□□□ 0.8
TRIM47-201ENST00000254816 ERICH4A6NGS2 130 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 DDX3YO15523 660 aaKnown RBP20.06■□□□□ 0.8
TRIM47-201ENST00000254816 PAEPP09466 180 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 COMTP21964 271 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 PAFAH1B1P43034 410 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 INCA1Q0VD86 236 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 C11orf63Q6NUN7 778 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 LRRC52Q8N7C0 313 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 RPGRIP1Q96KN7 1286 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 HEXIM2Q96MH2 286 aaKnown RBP20.06■□□□□ 0.8
TRIM47-201ENST00000254816 GAD1Q99259 594 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 ANAPC7Q9UJX3 599 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 NME7Q9Y5B8 376 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 TDRD15B5MCY1 1934 aaKnown RBP20.06■□□□□ 0.8
TRIM47-201ENST00000254816 CD4P01730 458 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 MYBL1P10243 752 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 CKBP12277 381 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 CFAP221Q4G0U5 840 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 RNF169Q8NCN4 708 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 TMEM35BQ8NCS4 154 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 GSTCDQ8NEC7 633 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 SPATA4Q8NEY3 305 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 TRIM11Q96F44 468 aa20.06■□□□□ 0.8
TRIM47-201ENST00000254816 AVENQ9NQS1 362 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms