RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ZCWPW1Q9H0M4 648 aa26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 L1RE1Q9UN81 338 aa26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 POLIQ9UNA4 740 aa26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 INSL5Q9Y5Q6 135 aa26.16■■□□□ 1.78
SDF2L1-201ENST00000248958 LRRIQ3A6PVS8 624 aaPredicted RBP26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 DCXO43602 365 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 SEC24AO95486 1093 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 CST3P01034 146 aaPredicted RBP26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 FAM163BP0C2L3 166 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 OR4Q2P0C623 313 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 LHX1P48742 406 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 MYL7Q01449 175 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 PLD1Q13393 1074 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 GRASPQ7Z6J2 395 aaPredicted RBP26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 DCP1BQ8IZD4 617 aaKnown RBP26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 ADSSL1Q8N142 457 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 ELMOD1Q8N336 334 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 OR10T2Q8NGX3 314 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 PLEKHO2Q8TD55 490 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 SYAP1Q96A49 352 aaPredicted RBP26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 MKNK1Q9BUB5 465 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.15■■□□□ 1.781e-8■■■■■ 29.8
SDF2L1-201ENST00000248958 MAN1B1Q9UKM7 699 aa26.15■■□□□ 1.78
SDF2L1-201ENST00000248958 CETN3O15182 167 aa26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 KRT13P13646 458 aa26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 SP100P23497 879 aaPredicted RBP26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 TSPY1Q01534 308 aa26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 LRRC63Q05C16 580 aa26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 BIRC3Q13489 604 aa26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 FAM186BQ8IYM0 893 aa26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 DHTKD1Q96HY7 919 aaPredicted RBP26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 RTP3Q9BQQ7 232 aa26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 ACBD6Q9BR61 282 aa26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 ZFP37Q9Y6Q3 630 aaPredicted RBP26.14■■□□□ 1.78
SDF2L1-201ENST00000248958 MTMR11A4FU01 709 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 PSMA7O14818 248 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 AKAP3O75969 853 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 C4BPAP04003 597 aaKnown RBP26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 PTPN2P17706 415 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 FSHRP23945 695 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 VAMP7P51809 220 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 SCARA3Q6AZY7 606 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 ADGRF2Q8IZF7 708 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 PGLYRP2Q96PD5 576 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 TMEM209Q96SK2 561 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 C1QTNF1Q9BXJ1 281 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 VRTNQ9H8Y1 702 aa26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 AVENQ9NQS1 362 aaPredicted RBP26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 DDX43Q9NXZ2 648 aaKnown RBP26.13■■□□□ 1.77
SDF2L1-201ENST00000248958 GABRDO14764 452 aa26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 GBP2P32456 591 aaPredicted RBP26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 FKBP3Q00688 224 aaKnown RBP26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 SOWAHAQ2M3V2 549 aa26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 LIMS2Q7Z4I7 341 aa26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 TRIML1Q8N9V2 468 aa26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 SPPL2BQ8TCT7 592 aa26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 KHSRPQ92945 711 aaKnown RBP eCLIP26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 GBP4Q96PP9 640 aa26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 DNMT3BQ9UBC3 853 aaKnown RBP26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 MUTYHQ9UIF7 546 aa26.12■■□□□ 1.77
SDF2L1-201ENST00000248958 C5orf42Q9H799 3197 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 EPB41P11171 864 aaKnown RBP26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 CCNE1P24864 410 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 PCSK1P29120 753 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 TUFMP49411 452 aaKnown RBP26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 MCCD1P59942 119 aaPredicted RBP26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 TNNC1P63316 161 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 DLG4P78352 724 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 TWF1Q12792 350 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 DUSP4Q13115 394 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 MORC3Q14149 939 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 NFE2Q16621 373 aaPredicted RBP26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 ZACNQ401N2 412 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 PABPC1LQ4VXU2 614 aaKnown RBP26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 SLC39A12Q504Y0 691 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 TDRD10Q5VZ19 366 aaKnown RBP26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 IQCEQ6IPM2 695 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 LEMD2Q8NC56 503 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 ZNF512Q96ME7 567 aaPredicted RBP26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 EPHX3Q9H6B9 360 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 EPS15L1Q9UBC2 864 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 YIPF1Q9Y548 306 aa26.11■■□□□ 1.77
SDF2L1-201ENST00000248958 VNN2O95498 520 aa26.1■■□□□ 1.77
SDF2L1-201ENST00000248958 WARSP23381 471 aaKnown RBP26.1■■□□□ 1.77
SDF2L1-201ENST00000248958 ALDH1A3P47895 512 aa26.1■■□□□ 1.77
SDF2L1-201ENST00000248958 MYL6P60660 151 aa26.1■■□□□ 1.77
SDF2L1-201ENST00000248958 WDR72Q3MJ13 1102 aa26.1■■□□□ 1.77
SDF2L1-201ENST00000248958 GET4Q7L5D6 327 aaPredicted RBP26.1■■□□□ 1.77
SDF2L1-201ENST00000248958 ZC3H3Q8IXZ2 948 aaKnown RBP26.1■■□□□ 1.77
SDF2L1-201ENST00000248958 MMS19Q96T76 1030 aa26.1■■□□□ 1.77
SDF2L1-201ENST00000248958 ASB3Q9Y575 518 aa26.1■■□□□ 1.77
SDF2L1-201ENST00000248958 DOCK6Q96HP0 2047 aa26.1■■□□□ 1.77
SDF2L1-201ENST00000248958 TACC1O75410 805 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 RHOP08100 348 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 EPHB3P54753 998 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 NCOA4Q13772 614 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 PTPN21Q16825 1174 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 SGSM1Q2NKQ1 1148 aa26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 INTS6LQ5JSJ4 861 aaKnown RBP26.09■■□□□ 1.77
SDF2L1-201ENST00000248958 ANKRD40Q6AI12 368 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms