RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 TNNC1P63316 161 aa24.85■■□□□ 1.57
SYNGR3-201ENST00000248121 PTP4A2Q12974 167 aa24.85■■□□□ 1.57
SYNGR3-201ENST00000248121 ZNF394Q53GI3 561 aa24.85■■□□□ 1.57
SYNGR3-201ENST00000248121 ZMAT2Q96NC0 199 aaKnown RBP24.85■■□□□ 1.57
SYNGR3-201ENST00000248121 ASB7Q9H672 318 aa24.85■■□□□ 1.57
SYNGR3-201ENST00000248121 KRIT1O00522 736 aa24.85■■□□□ 1.57
SYNGR3-201ENST00000248121 TRIM71Q2Q1W2 868 aaKnown RBP24.85■■□□□ 1.57
SYNGR3-201ENST00000248121 MAP9Q49MG5 647 aa24.85■■□□□ 1.57
SYNGR3-201ENST00000248121 GDF3Q9NR23 364 aa24.85■■□□□ 1.57
SYNGR3-201ENST00000248121 SCN1AP35498 2009 aa24.85■■□□□ 1.57
SYNGR3-201ENST00000248121 M0QZ92 97 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 CABYRO75952 493 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 HEXIM1O94992 359 aaKnown RBP24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 ITGB3P05106 788 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 MYBL1P10243 752 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 TNFRSF8P28908 595 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 PHF13Q86YI8 300 aaPredicted RBP24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 GDAP1L1Q96MZ0 367 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 C11orf70Q9BRQ4 267 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 DDX47Q9H0S4 455 aaKnown RBP24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 NXF1Q9UBU9 619 aaKnown RBP24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 ST3GAL5Q9UNP4 418 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 RECQL4O94761 1208 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 BRD2P25440 801 aaKnown RBP24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 PCBP1Q15365 356 aaKnown RBP eCLIP24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 GLRA4Q5JXX5 417 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 RSPH3Q86UC2 560 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 TFAP2BQ92481 460 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 SNX27Q96L92 541 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 BCO2Q9BYV7 579 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 WNT8AQ9H1J5 351 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 STARD7Q9NQZ5 370 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 ANAPC7Q9UJX3 599 aa24.84■■□□□ 1.57
SYNGR3-201ENST00000248121 ESYT3A0FGR9 886 aa24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 SART1O43290 800 aaKnown RBP24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 AXLP30530 894 aa24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 RAP1GAPP47736 663 aa24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 NFX1Q12986 1120 aaKnown RBP24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 KYAT1Q16773 422 aa24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 RPAINQ86UA6 219 aa24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 TRIM11Q96F44 468 aa24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 DEFB118Q96PH6 123 aa24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 TSEN34Q9BSV6 310 aaKnown RBP24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 TRIM6Q9C030 488 aaPredicted RBP24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 SDCBP2Q9H190 292 aa24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 KLK14Q9P0G3 267 aa24.83■■□□□ 1.57
SYNGR3-201ENST00000248121 MEIS3P2A8K0S8 358 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 CCDC188H7C350 402 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 RPS6KA5O75582 802 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 CTNNA1P35221 906 aaKnown RBP24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 GUCY2DQ02846 1103 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 MMS22LQ6ZRQ5 1243 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 UBL4BQ8N7F7 174 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 ARRDC4Q8NCT1 418 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 SMG8Q8ND04 991 aaKnown RBP24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 PAK6Q9NQU5 681 aaPredicted RBP24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 ADAM22Q9P0K1 906 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 NOD1Q9Y239 953 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 GHRP10912 638 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 CTNNA2P26232 953 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 SMC1AQ14683 1233 aaKnown RBP24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 TMEM132DQ14C87 1099 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 TRADDQ15628 312 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 WDR72Q3MJ13 1102 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 KIF12Q96FN5 646 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 EPB41L5Q9HCM4 733 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 IPPQ9Y573 584 aa24.82■■□□□ 1.56
SYNGR3-201ENST00000248121 SPOPO43791 374 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 CARSP49589 748 aaKnown RBP24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 CDH8P55286 799 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 PTK7Q13308 1070 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 ZNF667Q5HYK9 610 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 ZNF618Q5T7W0 954 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 TWF2Q6IBS0 349 aaKnown RBP24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 VCPIP1Q96JH7 1222 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 PCDHA3Q9Y5H8 950 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 MKI67P46013 3256 aaKnown RBP24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 CD52P31358 61 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 KCTD19Q17RG1 926 aaPredicted RBP24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 SLC43A3Q8NBI5 491 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 CASKIN2Q8WXE0 1202 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 ZBTB9Q96C00 473 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 SMYD3Q9H7B4 428 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 VRTNQ9H8Y1 702 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 ERVK-5Q9HDB9 667 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 TUBGCP4Q9UGJ1 667 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 PHF24Q9UPV7 400 aa24.81■■□□□ 1.56
SYNGR3-201ENST00000248121 BHMG1C9JSJ3 638 aaPredicted RBP24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 PYGMP11217 842 aa24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 C1QTNF8P60827 252 aa24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 C1QBPQ07021 282 aaKnown RBP24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 MAMLD1Q13495 774 aa24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 FBXO47Q5MNV8 452 aa24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 PLEKHA7Q6IQ23 1121 aa24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 ADAT2Q7Z6V5 191 aaKnown RBP24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 IFT20Q8IY31 132 aa24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 ZDHHC14Q8IZN3 488 aa24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 WDTC1Q8N5D0 677 aa24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 C18orf25Q96B23 403 aaPredicted RBP24.8■■□□□ 1.56
SYNGR3-201ENST00000248121 C2CD2Q9Y426 696 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms