RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 IGKV6-21A0A0C4DH24 114 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 TCRBV5S1A1TA0A578 114 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 ITGBL1O95965 494 aaPredicted RBP18.4■□□□□ 0.54
LRFN3-201ENST00000246529 PSMC4P43686 418 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 IFNAR2P48551 515 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 IGBP1P78318 339 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 TTC31Q49AM3 519 aaPredicted RBP18.4■□□□□ 0.54
LRFN3-201ENST00000246529 GJC2Q5T442 439 aaPredicted RBP18.4■□□□□ 0.54
LRFN3-201ENST00000246529 ATF7IP2Q5U623 682 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 IZUMO3Q5VZ72 239 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 DENND1BQ6P3S1 775 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 DCUN1D2Q6PH85 259 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 C6orf89Q6UWU4 347 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 SYDE1Q6ZW31 735 aaPredicted RBP18.4■□□□□ 0.54
LRFN3-201ENST00000246529 EXOC3L1Q86VI1 746 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 IPO4Q8TEX9 1081 aaKnown RBP18.4■□□□□ 0.54
LRFN3-201ENST00000246529 TCP11Q8WWU5 503 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 SLITRK1Q96PX8 696 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 PRMT1Q99873 361 aaKnown RBP18.4■□□□□ 0.54
LRFN3-201ENST00000246529 JPH2Q9BR39 696 aaPredicted RBP18.4■□□□□ 0.54
LRFN3-201ENST00000246529 FHDC1Q9C0D6 1143 aaPredicted RBP18.4■□□□□ 0.54
LRFN3-201ENST00000246529 TMEM51Q9NW97 253 aa18.4■□□□□ 0.54
LRFN3-201ENST00000246529 LGR5O75473 907 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 KRT19P08727 400 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 CXCL8P10145 99 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 ETS1P14921 441 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 AP3M2P53677 418 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 CDH8P55286 799 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 TNFAIP8L3Q5GJ75 292 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 MPZL3Q6UWV2 235 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 SPATS2Q86XZ4 545 aaKnown RBP18.39■□□□□ 0.53
LRFN3-201ENST00000246529 CHMP6Q96FZ7 201 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 TRAIPQ9BWF2 469 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 NINJ2Q9NZG7 142 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 DNPEPQ9ULA0 475 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 GOLGA8SH3BPF8 625 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 TTC4O95801 387 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 CDR1P51861 262 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 GRM1Q13255 1194 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 SPRED3Q2MJR0 410 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 EFCAB12Q6NXP0 572 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 TMEM35BQ8NCS4 154 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 C9orf72Q96LT7 481 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 MMP19Q99542 508 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 PTPRHQ9HD43 1115 aa18.39■□□□□ 0.53
LRFN3-201ENST00000246529 INTS9Q9NV88 658 aaKnown RBP18.39■□□□□ 0.53
LRFN3-201ENST00000246529 C5orf60A6NFR6 353 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 CALB1P05937 261 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 PROZP22891 400 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 IREB2P48200 963 aaKnown RBP18.38■□□□□ 0.53
LRFN3-201ENST00000246529 TTLL12Q14166 644 aaPredicted RBP18.38■□□□□ 0.53
LRFN3-201ENST00000246529 LRRC14Q15048 493 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 FBXW10Q5XX13 1052 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 TSHZ1Q6ZSZ6 1077 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 MGARPQ8TDB4 240 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 RNPEPQ9H4A4 650 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 CYTH4Q9UIA0 394 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 CAPN7Q9Y6W3 813 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 PAPPA2Q9BXP8 1791 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 OTOFQ9HC10 1997 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 TXNP10599 105 aaKnown RBP18.38■□□□□ 0.53
LRFN3-201ENST00000246529 CD19P15391 556 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 KLRC2P26717 231 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 P3H1Q32P28 736 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 PLPPR4Q7Z2D5 763 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 ERICH1Q86X53 443 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 CENPTQ96BT3 561 aa18.38■□□□□ 0.53
LRFN3-201ENST00000246529 ZNF317Q96PQ6 595 aaPredicted RBP18.38■□□□□ 0.53
LRFN3-201ENST00000246529 ADARB2Q9NS39 739 aaKnown RBP18.38■□□□□ 0.53
LRFN3-201ENST00000246529 ATXN2Q99700 1313 aaKnown RBP18.37■□□□□ 0.53
LRFN3-201ENST00000246529 ACKR2O00590 384 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 LIASO43766 372 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 KCTD2Q14681 263 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 PPP1R15BQ5SWA1 713 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 MFSD5Q6N075 450 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 CCDC62Q6P9F0 684 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 ERO1BQ86YB8 467 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 CABS1Q96KC9 395 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 CDT1Q9H211 546 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 FZD8Q9H461 694 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 HOMER3Q9NSC5 361 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 LRRC37A2A6NM11 1700 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 LSM8O95777 96 aaKnown RBP18.37■□□□□ 0.53
LRFN3-201ENST00000246529 CPP00450 1065 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 TNNC2P02585 160 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 NFICP08651 508 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 CETPP11597 493 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 SPOCD1Q6ZMY3 1216 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 RCOR2Q8IZ40 523 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 CACNA2D3Q8IZS8 1091 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 CCDC89Q8N998 374 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 C2orf40Q9H1Z8 148 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 MLXIPLQ9NP71 852 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 HMGXB4Q9UGU5 601 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 SIX4Q9UIU6 781 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 AGTPBP1Q9UPW5 1226 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 ZNF148Q9UQR1 794 aa18.37■□□□□ 0.53
LRFN3-201ENST00000246529 DNAJC25-GNG10A0A024R161 153 aa18.36■□□□□ 0.53
LRFN3-201ENST00000246529 LRRD1A4D1F6 860 aa18.36■□□□□ 0.53
LRFN3-201ENST00000246529 GPR25O00155 361 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms