RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 RPS6KA2Q15349 733 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 TAF1CQ15572 869 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 COBLL1Q53SF7 1204 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 ATG16L1Q676U5 607 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 EFCAB12Q6NXP0 572 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 FASTKD5Q7L8L6 764 aaKnown RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 LNX1Q8TBB1 728 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 SYTL5Q8TDW5 730 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 ABTB1Q969K4 478 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 DDX27Q96GQ7 796 aaKnown RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 HES6Q96HZ4 224 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 POLR3CQ9BUI4 534 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 WDR70Q9NW82 654 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 WHRNQ9P202 907 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 GTPBP10A4D1E9 387 aaKnown RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 TISP43B9A030 160 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 TRPA1O75762 1119 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 CALB1P05937 261 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 KRT16P08779 473 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 LCP1P13796 627 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 NCF2P19878 526 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 HOXA10P31260 410 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 TCF7P36402 384 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 MMP13P45452 471 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 BCAR1P56945 870 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 AP2B1P63010 937 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 ECM1Q16610 540 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 LACTB2Q53H82 288 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 GLRA4Q5JXX5 417 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 BZW1Q7L1Q6 419 aaKnown RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 MYLK4Q86YV6 388 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 PIP4K2CQ8TBX8 421 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 DHX38Q92620 1227 aaKnown RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 CCDC124Q96CT7 223 aaKnown RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 PDCD2LQ9BRP1 358 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 C2orf40Q9H1Z8 148 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 PSMC3IPQ9P2W1 217 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 CCDC78A2IDD5 438 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 BTNL10A8MVZ5 291 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 KRT37O76014 449 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 NCALDP61601 193 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 NOP14P78316 857 aaKnown RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 RGS9BPQ6ZS82 235 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 PRELID2Q8N945 189 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 GABPB2Q8TAK5 448 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 SKA2Q8WVK7 121 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 HAS1Q92839 578 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 GMCL1Q96IK5 515 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 SLC13A1Q9BZW2 595 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 ERVK-5Q9HDB9 667 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 PAPOLBQ9NRJ5 636 aaKnown RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 HNRNPCL1O60812 293 aaKnown RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 FGRP09769 529 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 EPHB2P29323 1055 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 SLC1A1P43005 524 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 NPTX2P47972 431 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 EFNA5P52803 228 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 NLRP11P59045 1033 aaKnown RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 DYNC1I2Q13409 638 aaKnown RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 CUL3Q13618 768 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 KDELC2Q7Z4H8 507 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 EXOC3L1Q86VI1 746 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 RYBPQ8N488 228 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 OR6J1Q8NGC5 347 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 ALG3Q92685 438 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 ACAP3Q96P50 834 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 MARCOQ9UEW3 520 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 TBX20Q9UMR3 447 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 CCL15-CCL14A0A0B4J2E2 113 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 SLC26A4O43511 780 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 SH3BP5O60239 455 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 CBX6O95503 412 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 KRT4P19013 534 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 NUMBP49757 651 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 CCL15Q16663 113 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 AMHR2Q16671 573 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 ASTE1Q2TB18 679 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 TAF1BQ53T94 588 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 SPDYCQ5MJ68 293 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 C11orf63Q6NUN7 778 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 BEST2Q8NFU1 509 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 UBA3Q8TBC4 463 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 PPP1R13LQ8WUF5 828 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 SPIRE2Q8WWL2 714 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 PIK3R5Q8WYR1 880 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 SLC5A5Q92911 643 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 MCEEQ96PE7 176 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 GCOM2Q9BZD3 368 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 DCLRE1BQ9H816 532 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 CYP4F11Q9HBI6 524 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 METTL5Q9NRN9 209 aaKnown RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 POLIQ9UNA4 740 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 NR2E1Q9Y466 385 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 hCG_2014768A0A024R1R8 64 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 A8MUI8 341 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 B2RBV5 119 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 CNTN2Q02246 1040 aa9.73□□□□□ -0.85
COL21A1-201ENST00000244728 TSTA3Q13630 321 aaPredicted RBP9.73□□□□□ -0.85
COL21A1-201ENST00000244728 CBWD6Q4V339 395 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms