RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ATL2Q8NHH9 583 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 FAM162AQ96A26 154 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 ZNF335Q9H4Z2 1342 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 HDAC4P56524 1084 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 LSM3P62310 102 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 GRIP2Q9C0E4 1043 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 ATF5Q9Y2D1 282 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 INO80Q9ULG1 1556 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 HNRNPRO43390 633 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 CST8O60676 142 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 IL10P22301 178 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 KPNB1Q14974 876 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 HAUS6Q7Z4H7 955 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 NOL6Q9H6R4 1146 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 ARHGAP20Q9P2F6 1191 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 SLC13A4Q9UKG4 626 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 PDGFRAP16234 1089 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 ARMCX6Q7L4S7 300 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 MTMR8Q96EF0 704 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 AGAP1Q9UPQ3 857 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 A8MXQ7 604 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 KRT33BQ14525 404 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 PLEKHA7Q6IQ23 1121 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 DGKHQ86XP1 1220 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 EMID1Q96A84 441 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 C7orf25Q9BPX7 421 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 ZBED2Q9BTP6 218 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 GEMIN8Q9NWZ8 242 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 TTC33Q6PID6 262 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 TRIM65Q6PJ69 517 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 GPD1LQ8N335 351 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 KIF12Q96FN5 646 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 OSBPL8Q9BZF1 889 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 ZBTB11O95625 1053 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 INPP5AQ14642 412 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 C1orf131Q8NDD1 294 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 PAPOLBQ9NRJ5 636 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 DAPK2Q9UIK4 370 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 CNTNAP5Q8WYK1 1306 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 FOXN3O00409 490 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 STAT4Q14765 748 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 NEDD8Q15843 81 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 ZNF571Q7Z3V5 609 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 FRMD5Q7Z6J6 570 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 SLC44A2Q8IWA5 706 aaPredicted RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 SCUBE1Q8IWY4 988 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 SNX31Q8N9S9 440 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 HIC2Q96JB3 615 aa7.86□□□□□ -1.15
RIF1-201ENST00000243326 MTO1Q9Y2Z2 717 aaKnown RBP7.86□□□□□ -1.15
RIF1-201ENST00000243326 ABCA6Q8N139 1617 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 CPSF1Q10570 1443 aaKnown RBP7.85□□□□□ -1.15
RIF1-201ENST00000243326 FAM205AQ6ZU69 1335 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 NR5A2O00482 541 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 TTC25Q96NG3 672 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 SERPINI2O75830 405 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 SH3BGRP55822 239 aaPredicted RBP7.85□□□□□ -1.15
RIF1-201ENST00000243326 ELF3P78545 371 aaPredicted RBP7.85□□□□□ -1.15
RIF1-201ENST00000243326 NRF1Q16656 503 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 TMEM79Q9BSE2 394 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 AIPL1Q9NZN9 384 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 TUBE1Q9UJT0 475 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 FAM200BP0CF97 657 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 ZSCAN5DPP0CG00 497 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 C11orf96Q7Z7L8 435 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 MMTAG2Q9BU76 263 aaKnown RBP7.85□□□□□ -1.15
RIF1-201ENST00000243326 ATP6V0A4Q9HBG4 840 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 ZNF302Q9NR11 478 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.85□□□□□ -1.15
RIF1-201ENST00000243326 PARVAQ9NVD7 372 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 ASNSD1Q9NWL6 643 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 C15orf41Q9Y2V0 281 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 TBX22Q9Y458 520 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 SHROOM2Q13796 1616 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 ACTR2P61160 394 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 AS3MTQ9HBK9 375 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 APEX2Q9UBZ4 518 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 POLEQ07864 2286 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 ENDOD1O94919 500 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 FGFR2P21802 821 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 GTF2H1P32780 548 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 RPL21P46778 160 aaKnown RBP7.85□□□□□ -1.15
RIF1-201ENST00000243326 LRRC71Q8N4P6 559 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 PYDC1Q8WXC3 89 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 SEPHS2Q99611 448 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 EIF2AQ9BY44 585 aaKnown RBP7.85□□□□□ -1.15
RIF1-201ENST00000243326 CHKBQ9Y259 395 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 MAGEA13PA6NCF6 341 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 RGS5O15539 181 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 KRT36O76013 467 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 PON1P27169 355 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 SDC4P31431 198 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 FBXO36Q8NEA4 188 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 GRAMD1AQ96CP6 724 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 PAIP1Q9H074 479 aaKnown RBP7.85□□□□□ -1.15
RIF1-201ENST00000243326 A0A087X0B3 334 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 PGM3O95394 542 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 PSMC6P62333 389 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 ERVK-9P63128 1117 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 CAV1Q03135 178 aa7.85□□□□□ -1.15
RIF1-201ENST00000243326 CYLC2Q14093 348 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms