RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 TRIP11Q15643 1979 aa14.11□□□□□ -0.15
SLIRP-201ENST00000238688 UQCRHLA0A096LP55 91 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 B4GALT5O43286 388 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 UQCRHP07919 91 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 MYBL1P10243 752 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 CYP11B1P15538 503 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 ITIH3Q06033 890 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 TMEM132DQ14C87 1099 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 CLUL1Q15846 466 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 EEF1DP3Q658K8 133 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 TMEM192Q8IY95 271 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 THNSL1Q8IYQ7 743 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 VCPIP1Q96JH7 1222 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 NECAB3Q96P71 396 aaPredicted RBP14.1□□□□□ -0.15
SLIRP-201ENST00000238688 NOCTQ9UK39 431 aaKnown RBP14.1□□□□□ -0.15
SLIRP-201ENST00000238688 SAR1BQ9Y6B6 198 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 PLXNA4Q9HCM2 1894 aa14.1□□□□□ -0.15
SLIRP-201ENST00000238688 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.09□□□□□ -0.15
SLIRP-201ENST00000238688 RCCD1A6NED2 376 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 TTLL13PA6NNM8 815 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 H3BNC9 293 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 MGEA5O60502 916 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 LRRN2O75325 713 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 DGKIO75912 1065 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 MTA2O94776 668 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 LSM8O95777 96 aaKnown RBP14.09□□□□□ -0.15
SLIRP-201ENST00000238688 HARSP12081 509 aaKnown RBP14.09□□□□□ -0.15
SLIRP-201ENST00000238688 TNFSF9P41273 254 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 AMPD2Q01433 879 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 SKIV2LQ15477 1246 aaKnown RBP14.09□□□□□ -0.15
SLIRP-201ENST00000238688 KIZQ2M2Z5 673 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 ZNF699Q32M78 642 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 ZBTB41Q5SVQ8 909 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 GLYCTKQ8IVS8 523 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 SAMD11Q96NU1 681 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 ZNF518BQ9C0D4 1074 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 MTMR12Q9C0I1 747 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 TSPYL2Q9H2G4 693 aaPredicted RBP14.09□□□□□ -0.15
SLIRP-201ENST00000238688 ERVK-5Q9HDB9 667 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 UVRAGQ9P2Y5 699 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 COG5Q9UP83 839 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 NOC2LQ9Y3T9 749 aaKnown RBP14.09□□□□□ -0.15
SLIRP-201ENST00000238688 PTPRJQ12913 1337 aa14.09□□□□□ -0.15
SLIRP-201ENST00000238688 MACROD2A1Z1Q3 448 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 C5orf67F2Z3F1 127 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 TNFRSF10AO00220 468 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 CXCL8P10145 99 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 PAX3P23760 479 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 HOXA11P31270 313 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-201ENST00000238688 ZNF132P52740 706 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 RBP5P82980 135 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 TFAMQ00059 246 aaKnown RBP14.08□□□□□ -0.16
SLIRP-201ENST00000238688 GPM6BQ13491 265 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 ZNF667Q5HYK9 610 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 LRRC52Q8N7C0 313 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 UBR7Q8N806 425 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 OR5B17Q8NGF7 314 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 OLIG1Q8TAK6 271 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 LNX1Q8TBB1 728 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-201ENST00000238688 CLP1Q92989 425 aaKnown RBP14.08□□□□□ -0.16
SLIRP-201ENST00000238688 HLA-CQ95604 372 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 MRPL38Q96DV4 380 aaKnown RBP14.08□□□□□ -0.16
SLIRP-201ENST00000238688 TRAIPQ9BWF2 469 aa14.08□□□□□ -0.16
SLIRP-201ENST00000238688 TRIM6Q9C030 488 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-201ENST00000238688 CYP26A1O43174 497 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 PAEPP09466 180 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 FAM163BP0C2L3 166 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 ATF7P17544 494 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-201ENST00000238688 CYP3A5P20815 502 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 ACO1P21399 889 aaKnown RBP14.07□□□□□ -0.16
SLIRP-201ENST00000238688 BMPR1AP36894 532 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 USP8P40818 1118 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 PNPLA4P41247 253 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 RAB27AP51159 221 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 GPC5P78333 572 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 MYO1EQ12965 1108 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 SLC10A6Q3KNW5 377 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 XKR4Q5GH76 650 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 EFCAB13Q8IY85 973 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 FIBCD1Q8N539 461 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 DDX1Q92499 740 aaKnown RBP14.07□□□□□ -0.16
SLIRP-201ENST00000238688 TATDN2Q93075 761 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 SNX27Q96L92 541 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 UHRF1Q96T88 793 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-201ENST00000238688 OSMRQ99650 979 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 FTHL17Q9BXU8 183 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 BCO2Q9BYV7 579 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 IRX2Q9BZI1 471 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-201ENST00000238688 XYLT2Q9H1B5 865 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 AVENQ9NQS1 362 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-201ENST00000238688 CNTN3Q9P232 1028 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 GTF3C4Q9UKN8 822 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 KIAA1257Q9ULG3 409 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 SNX12Q9UMY4 172 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 HYOU1Q9Y4L1 999 aa14.07□□□□□ -0.16
SLIRP-201ENST00000238688 LACTBL1A8MY62 500 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 GPR182O15218 404 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 FANCGO15287 622 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 GRM6O15303 877 aa14.06□□□□□ -0.16
SLIRP-201ENST00000238688 MED7O43513 233 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms