RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 OTUD5Q96G74 571 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 FNBP1Q96RU3 617 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 KLHL11Q9NVR0 708 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 SEPT9Q9UHD8 586 aaPredicted RBP16.43■□□□□ 0.22
CTSD-201ENST00000236671 ZNF112Q9UJU3 913 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 SCINQ9Y6U3 715 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 GSTTP1A0A1W2PQM5 241 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 LIASO43766 372 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 CCNB1P14635 433 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 IREB2P48200 963 aaKnown RBP16.43■□□□□ 0.22
CTSD-201ENST00000236671 NFX1Q12986 1120 aaKnown RBP16.43■□□□□ 0.22
CTSD-201ENST00000236671 SWSAP1Q6NVH7 229 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 XRRA1Q6P2D8 792 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 TMEM270Q6UE05 265 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 CEP128Q6ZU80 1094 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 GSTA5Q7RTV2 222 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 ECHDC2Q86YB7 292 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 ANKRD35Q8N283 1001 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 AGAP11Q8TF27 550 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 GRAMD1AQ96CP6 724 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 CYP26B1Q9NR63 512 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 KLHL14Q9P2G3 628 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 PCDHB4Q9Y5E5 795 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 STYXL1Q9Y6J8 313 aa16.43■□□□□ 0.22
CTSD-201ENST00000236671 DNALI1O14645 258 aaPredicted RBP16.42■□□□□ 0.22
CTSD-201ENST00000236671 CCND2P30279 289 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 SSR1P43307 286 aaKnown RBP16.42■□□□□ 0.22
CTSD-201ENST00000236671 ACOT2P49753 483 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 PRKCEQ02156 737 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 C1QBPQ07021 282 aaKnown RBP16.42■□□□□ 0.22
CTSD-201ENST00000236671 CCDC15Q0P6D6 951 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 BAATQ14032 418 aaPredicted RBP16.42■□□□□ 0.22
CTSD-201ENST00000236671 LDLRAD1Q5T700 205 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 TRABD2AQ86V40 505 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 CCDC60Q8IWA6 550 aaPredicted RBP16.42■□□□□ 0.22
CTSD-201ENST00000236671 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 CFAP57Q96MR6 1250 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 HAPLN2Q9GZV7 340 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 SAYSD1Q9NPB0 183 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 L3MBTL1Q9Y468 752 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 EXOC1LA0A1B0GW35 172 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 ZBED4O75132 1171 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 RGS20O76081 388 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 ASMTLO95671 621 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 KRT10P13645 584 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 TCF4P15884 667 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 IL9RQ01113 521 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 CCDC142Q17RM4 750 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 ATP13A4Q4VNC1 1196 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 RBBP8NLQ8NC74 664 aaPredicted RBP16.42■□□□□ 0.22
CTSD-201ENST00000236671 FEZF2Q8TBJ5 459 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 PRCCQ92733 491 aaPredicted RBP16.42■□□□□ 0.22
CTSD-201ENST00000236671 WNK4Q96J92 1243 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 SLITRK1Q96PX8 696 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 AGO2Q9UKV8 859 aaKnown RBP16.42■□□□□ 0.22
CTSD-201ENST00000236671 DNPEPQ9ULA0 475 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 TRIM33Q9UPN9 1127 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 CNTN6Q9UQ52 1028 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 RIPK3Q9Y572 518 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 TLL2Q9Y6L7 1015 aa16.42■□□□□ 0.22
CTSD-201ENST00000236671 A8MUI8 341 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 PI4K2BG5E9Z4 385 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 H0YCG3 227 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 IRF6O14896 467 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 DKC1O60832 514 aaKnown RBP eCLIP16.41■□□□□ 0.221e-14■□□□□ 9.7
CTSD-201ENST00000236671 PSAPP07602 524 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 NR3C2P08235 984 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 SKIV2L2P42285 1042 aaKnown RBP16.41■□□□□ 0.22
CTSD-201ENST00000236671 ZNF157P51786 506 aaPredicted RBP16.41■□□□□ 0.22
CTSD-201ENST00000236671 LMNB2Q03252 620 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 DRICH1Q6PGQ1 229 aaPredicted RBP16.41■□□□□ 0.22
CTSD-201ENST00000236671 FAM47EQ6ZV65 393 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 TDRPQ86YL5 185 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 ANKRD13AQ8IZ07 590 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 OPTNQ96CV9 577 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 RNF146Q9NTX7 359 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 PARVAQ9NVD7 372 aa16.41■□□□□ 0.22
CTSD-201ENST00000236671 CTDP1Q9Y5B0 961 aaPredicted RBP16.41■□□□□ 0.22
CTSD-201ENST00000236671 A0A1B0GUA9 196 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 MAGEB2O15479 319 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 MAFGO15525 162 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 ZSCAN5DPP0CG00 497 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 PTPRAP18433 802 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 RPL7AP62424 266 aaKnown RBP16.4■□□□□ 0.22
CTSD-201ENST00000236671 MYO1EQ12965 1108 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 NR1H3Q13133 447 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 FASTKD3Q14CZ7 662 aaKnown RBP16.4■□□□□ 0.22
CTSD-201ENST00000236671 RCOR2Q8IZ40 523 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 SCYL3Q8IZE3 742 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 ALLCQ8N6M5 410 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 DENND1AQ8TEH3 1009 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 RBM41Q96IZ5 413 aaKnown RBP16.4■□□□□ 0.22
CTSD-201ENST00000236671 TTC25Q96NG3 672 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 PITPNM3Q9BZ71 974 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 RPAP3Q9H6T3 665 aaPredicted RBP16.4■□□□□ 0.22
CTSD-201ENST00000236671 JPH1Q9HDC5 661 aaPredicted RBP16.4■□□□□ 0.22
CTSD-201ENST00000236671 UBN1Q9NPG3 1134 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 RBAKQ9NYW8 714 aaPredicted RBP16.4■□□□□ 0.22
CTSD-201ENST00000236671 IP6K2Q9UHH9 426 aa16.4■□□□□ 0.22
CTSD-201ENST00000236671 NUB1Q9Y5A7 615 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms