RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 MYL4P12829 197 aa8.8□□□□□ -1
SPARC-201ENST00000231061 ALOX12P18054 663 aa8.8□□□□□ -1
SPARC-201ENST00000231061 DIO1P49895 249 aa8.8□□□□□ -1
SPARC-201ENST00000231061 ARFIP1P53367 373 aa8.8□□□□□ -1
SPARC-201ENST00000231061 RPS8P62241 208 aaKnown RBP8.8□□□□□ -1
SPARC-201ENST00000231061 DSC3Q14574 896 aa8.8□□□□□ -1
SPARC-201ENST00000231061 FSCBQ5H9T9 825 aa8.8□□□□□ -1
SPARC-201ENST00000231061 AGMOQ6ZNB7 445 aa8.8□□□□□ -1
SPARC-201ENST00000231061 ZNF467Q7Z7K2 595 aaPredicted RBP8.8□□□□□ -1
SPARC-201ENST00000231061 MARCH10Q8NA82 808 aaPredicted RBP8.8□□□□□ -1
SPARC-201ENST00000231061 TRPC4APQ8TEL6 797 aa8.8□□□□□ -1
SPARC-201ENST00000231061 SLC2A13Q96QE2 648 aa8.8□□□□□ -1
SPARC-201ENST00000231061 ANKZF1Q9H8Y5 726 aa8.8□□□□□ -1
SPARC-201ENST00000231061 SLC40A1Q9NP59 571 aa8.8□□□□□ -1
SPARC-201ENST00000231061 PCDHA4Q9UN74 947 aa8.8□□□□□ -1
SPARC-201ENST00000231061 RBMX2Q9Y388 322 aaKnown RBP8.8□□□□□ -1
SPARC-201ENST00000231061 FAM32AQ9Y421 112 aaKnown RBP8.8□□□□□ -1
SPARC-201ENST00000231061 MYH6P13533 1939 aa8.8□□□□□ -1
SPARC-201ENST00000231061 BAZ2AQ9UIF9 1905 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 USP17L3A6NCW0 530 aa8.79□□□□□ -1
SPARC-201ENST00000231061 USP17L4A6NCW7 530 aa8.79□□□□□ -1
SPARC-201ENST00000231061 VSTM5A8MXK1 200 aa8.79□□□□□ -1
SPARC-201ENST00000231061 SCAMP3O14828 347 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 MCF2LO15068 1137 aa8.79□□□□□ -1
SPARC-201ENST00000231061 WEE2P0C1S8 567 aa8.79□□□□□ -1
SPARC-201ENST00000231061 ASMTP46597 345 aa8.79□□□□□ -1
SPARC-201ENST00000231061 HADHBP55084 474 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 RPP38P78345 283 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 SMARCB1Q12824 385 aa8.79□□□□□ -1
SPARC-201ENST00000231061 BLMHQ13867 455 aa8.79□□□□□ -1
SPARC-201ENST00000231061 BCL2A1Q16548 175 aa8.79□□□□□ -1
SPARC-201ENST00000231061 MAPKAPK3Q16644 382 aa8.79□□□□□ -1
SPARC-201ENST00000231061 ENOSF1Q7L5Y1 443 aa8.79□□□□□ -1
SPARC-201ENST00000231061 USP17L1Q7RTZ2 530 aa8.79□□□□□ -1
SPARC-201ENST00000231061 LSMEM2Q8N112 164 aa8.79□□□□□ -1
SPARC-201ENST00000231061 CADM3Q8N126 398 aa8.79□□□□□ -1
SPARC-201ENST00000231061 MYCBPAPQ8TBZ2 947 aa8.79□□□□□ -1
SPARC-201ENST00000231061 TMIGD2Q96BF3 282 aa8.79□□□□□ -1
SPARC-201ENST00000231061 EGLN2Q96KS0 407 aa8.79□□□□□ -1
SPARC-201ENST00000231061 CAPZA3Q96KX2 299 aa8.79□□□□□ -1
SPARC-201ENST00000231061 EHD1Q9H4M9 534 aa8.79□□□□□ -1
SPARC-201ENST00000231061 SUGCTQ9HAC7 445 aa8.79□□□□□ -1
SPARC-201ENST00000231061 ATP13A1Q9HD20 1204 aa8.79□□□□□ -1
SPARC-201ENST00000231061 ABCB6Q9NP58 842 aa8.79□□□□□ -1
SPARC-201ENST00000231061 PALMDQ9NP74 551 aa8.79□□□□□ -1
SPARC-201ENST00000231061 SLC35C2Q9NQQ7 365 aa8.79□□□□□ -1
SPARC-201ENST00000231061 TFR2Q9UP52 801 aa8.79□□□□□ -1
SPARC-201ENST00000231061 CLEC11AQ9Y240 323 aa8.79□□□□□ -1
SPARC-201ENST00000231061 XIRP1Q702N8 1843 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 TTC26A0AVF1 554 aa8.79□□□□□ -1
SPARC-201ENST00000231061 H7C1D1 291 aa8.79□□□□□ -1
SPARC-201ENST00000231061 UBXN8O00124 270 aa8.79□□□□□ -1
SPARC-201ENST00000231061 WDR46O15213 610 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 CYP2C9P11712 490 aa8.79□□□□□ -1
SPARC-201ENST00000231061 STILQ15468 1287 aa8.79□□□□□ -1
SPARC-201ENST00000231061 SPOCD1Q6ZMY3 1216 aa8.79□□□□□ -1
SPARC-201ENST00000231061 OTOP3Q7RTS5 596 aa8.79□□□□□ -1
SPARC-201ENST00000231061 HDXQ7Z353 690 aa8.79□□□□□ -1
SPARC-201ENST00000231061 CAGE1Q8TC20 777 aa8.79□□□□□ -1
SPARC-201ENST00000231061 INPP5DQ92835 1189 aa8.79□□□□□ -1
SPARC-201ENST00000231061 FGD4Q96M96 766 aa8.79□□□□□ -1
SPARC-201ENST00000231061 PRICKLE1Q96MT3 831 aaPredicted RBP8.79□□□□□ -1
SPARC-201ENST00000231061 TMEM60Q9H2L4 133 aa8.79□□□□□ -1
SPARC-201ENST00000231061 RPRD1BQ9NQG5 326 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 USP40Q9NVE5 1235 aa8.79□□□□□ -1
SPARC-201ENST00000231061 SAP30BPQ9UHR5 308 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 ANGPTL2Q9UKU9 493 aa8.79□□□□□ -1
SPARC-201ENST00000231061 ZMYND8Q9ULU4 1186 aaPredicted RBP8.79□□□□□ -1
SPARC-201ENST00000231061 SAMM50Q9Y512 469 aa8.79□□□□□ -1
SPARC-201ENST00000231061 CAPN8A6NHC0 703 aa8.79□□□□□ -1
SPARC-201ENST00000231061 NDUFA10O95299 355 aa8.79□□□□□ -1
SPARC-201ENST00000231061 F2P00734 622 aa8.79□□□□□ -1
SPARC-201ENST00000231061 RETP07949 1114 aa8.79□□□□□ -1
SPARC-201ENST00000231061 KRT4P19013 534 aa8.79□□□□□ -1
SPARC-201ENST00000231061 CAPN3P20807 821 aa8.79□□□□□ -1
SPARC-201ENST00000231061 PSMA4P25789 261 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 MTIF2P46199 727 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 LIPEQ05469 1076 aa8.79□□□□□ -1
SPARC-201ENST00000231061 CDONQ4KMG0 1287 aa8.79□□□□□ -1
SPARC-201ENST00000231061 ARL6IP4Q66PJ3 421 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 BNC2Q6ZN30 1099 aaPredicted RBP8.79□□□□□ -1
SPARC-201ENST00000231061 IKBIPQ70UQ0 350 aa8.79□□□□□ -1
SPARC-201ENST00000231061 SLC9B2Q86UD5 537 aa8.79□□□□□ -1
SPARC-201ENST00000231061 FAM228AQ86W67 206 aa8.79□□□□□ -1
SPARC-201ENST00000231061 ZNF444Q8N0Y2 327 aaPredicted RBP8.79□□□□□ -1
SPARC-201ENST00000231061 EPS8L1Q8TE68 723 aa8.79□□□□□ -1
SPARC-201ENST00000231061 SEPT1Q8WYJ6 367 aa8.79□□□□□ -1
SPARC-201ENST00000231061 NUDT16L1Q9BRJ7 211 aaKnown RBP8.79□□□□□ -1
SPARC-201ENST00000231061 NUP58Q9BVL2 599 aa8.79□□□□□ -1
SPARC-201ENST00000231061 CPVLQ9H3G5 476 aa8.79□□□□□ -1
SPARC-201ENST00000231061 A6NHS1 94 aa8.78□□□□□ -1
SPARC-201ENST00000231061 FOXO6A8MYZ6 492 aa8.78□□□□□ -1
SPARC-201ENST00000231061 RRP8O43159 456 aaKnown RBP8.78□□□□□ -1
SPARC-201ENST00000231061 SELLP14151 372 aa8.78□□□□□ -1
SPARC-201ENST00000231061 CPA3P15088 417 aa8.78□□□□□ -1
SPARC-201ENST00000231061 PMS1P54277 932 aaKnown RBP8.78□□□□□ -1
SPARC-201ENST00000231061 VSNL1P62760 191 aa8.78□□□□□ -1
SPARC-201ENST00000231061 ASIC1P78348 528 aa8.78□□□□□ -1
SPARC-201ENST00000231061 MCL1Q07820 350 aa8.78□□□□□ -1
SPARC-201ENST00000231061 TUBB2AQ13885 445 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms