RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 IFT20Q8IY31 132 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 EFCAB13Q8IY85 973 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 C7orf31Q8N865 590 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 CCDC26Q8TAB7 109 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 MAIP1Q8WWC4 291 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 PPM1EQ8WY54 764 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 ANKRD36BP1Q96IX9 119 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 ZBTB45Q96K62 511 aaPredicted RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 PACSIN1Q9BY11 444 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 FUT8Q9BYC5 575 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 AGO3Q9H9G7 860 aaKnown RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 RPF1Q9H9Y2 349 aaKnown RBP11.38□□□□□ -0.59
CDCA3-201ENST00000229265 CYP3A43Q9HB55 503 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 IFT122Q9HBG6 1241 aa11.38□□□□□ -0.59
CDCA3-201ENST00000229265 A0A1B0GUA9 196 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 PGRMC1O00264 195 aaKnown RBP11.37□□□□□ -0.59
CDCA3-201ENST00000229265 VNN1O95497 513 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 LSM8O95777 96 aaKnown RBP11.37□□□□□ -0.59
CDCA3-201ENST00000229265 FAM163BP0C2L3 166 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 P4HA1P13674 534 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 FOSL2P15408 326 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 ACO1P21399 889 aaKnown RBP11.37□□□□□ -0.59
CDCA3-201ENST00000229265 THPOP40225 353 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 USP8P40818 1118 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 PIK3CAP42336 1068 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 TMEM62Q0P6H9 643 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 TRPC3Q13507 836 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 CLEC16AQ2KHT3 1053 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 LIN9Q5TKA1 542 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 METTL13Q8N6R0 699 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 COG1Q8WTW3 980 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 ADPGKQ9BRR6 497 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 KATNAL1Q9BW62 490 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 THAP2Q9H0W7 228 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 SLITRK6Q9H5Y7 841 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 ZNF446Q9NWS9 450 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 ALG6Q9Y672 507 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 SLC4A7Q9Y6M7 1214 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 NLRC5Q86WI3 1866 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 MYO7AQ13402 2215 aa11.37□□□□□ -0.59
CDCA3-201ENST00000229265 CUL9Q8IWT3 2517 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 C17orf102A2RUQ5 167 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 PDE2AO00408 941 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 KCNK3O14649 394 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 ZNF185O15231 689 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 MED7O43513 233 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 BUB1BO60566 1050 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 LRRN2O75325 713 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 PAEPP09466 180 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 PNMA6AP0CW24 399 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 EIF4BP23588 611 aaKnown RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 CTNNA2P26232 953 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 GATMP50440 423 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 DRG2P55039 364 aaKnown RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 IGBP1P78318 339 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 CENPCQ03188 943 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 C1QBPQ07021 282 aaKnown RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 PTP4A2Q12974 167 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 DRP2Q13474 957 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 LPIN1Q14693 890 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 DCAF4L1Q3SXM0 396 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 PLEKHG4Q58EX7 1191 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 EMBQ6PCB8 327 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 SLC47A2Q86VL8 602 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 PHF13Q86YI8 300 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 UBR7Q8N806 425 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 NOA1Q8NC60 698 aaKnown RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 TMEM40Q8WWA1 233 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 CAPZA3Q96KX2 299 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 NECAB3Q96P71 396 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 GCOM2Q9BZD3 368 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 UBXN6Q9BZV1 441 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 DNAI2Q9GZS0 605 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 LHX5Q9H2C1 402 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 STIM2Q9P246 746 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 CTTNBP2NLQ9P2B4 639 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 HCSTQ9UBK5 93 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 FEZ2Q9UHY8 353 aaPredicted RBP11.36□□□□□ -0.59
CDCA3-201ENST00000229265 PCDHGC3Q9UN70 934 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 C2CD2Q9Y426 696 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 PCDHA3Q9Y5H8 950 aa11.36□□□□□ -0.59
CDCA3-201ENST00000229265 BRWD1Q9NSI6 2320 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 MBLAC1A4D2B0 266 aaPredicted RBP11.35□□□□□ -0.59
CDCA3-201ENST00000229265 TMCO5BA8MYB1 307 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 CST3P01034 146 aaPredicted RBP11.35□□□□□ -0.59
CDCA3-201ENST00000229265 MMEP08473 750 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 RHOXF2BP0C7M4 288 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 TMEM191BP0C7N4 346 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 KRT5P13647 590 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 GBP1P32455 592 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 CDH5P33151 784 aaPredicted RBP11.35□□□□□ -0.59
CDCA3-201ENST00000229265 ZNF132P52740 706 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 TFF2Q03403 129 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 PPFIA1Q13136 1202 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 GRIK4Q16099 956 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 AMHR2Q16671 573 aa11.35□□□□□ -0.59
CDCA3-201ENST00000229265 FAM26DQ5JW98 314 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms