RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 RPUSD2Q8IZ73 545 aaKnown RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 FUKQ8N0W3 1084 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 CGRRF1Q99675 332 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 EIF2AQ9BY44 585 aaKnown RBP12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 COL1A2P08123 1366 aa12.45□□□□□ -0.42
TNFAIP1-201ENST00000226225 TSPAN1O60635 241 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 SGPL1O95470 568 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 NFICP08651 508 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 H2AFZP0C0S5 128 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 CDC42EP1Q00587 391 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 TMEM132DQ14C87 1099 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 SURF1Q15526 300 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 TAF2Q6P1X5 1199 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 TSHZ1Q6ZSZ6 1077 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 H2AFVQ71UI9 128 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 SLC20A1Q8WUM9 679 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 MLXIPLQ9NP71 852 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 PTPRJQ12913 1337 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 P4HA2O15460 535 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 VIMP08670 466 aaKnown RBP12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 DARSP14868 501 aaKnown RBP12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 GJA9P57773 515 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 ZNF667Q5HYK9 610 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 C1orf220Q5T0J3 134 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 CDCA2Q69YH5 1023 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 JADE1Q6IE81 842 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 SLC47A2Q86VL8 602 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 RAPGEF5Q92565 580 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 PLCD4Q9BRC7 762 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 NXF3Q9H4D5 531 aaKnown RBP12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 PDZD7Q9H5P4 517 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 STK38LQ9Y2H1 464 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 BRCA2P51587 3418 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 THAP12O43422 761 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 SCTRP47872 440 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 TNNC1P63316 161 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 MCL1Q07820 350 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 DHX9Q08211 1270 aaKnown RBP12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 HIC1Q14526 733 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 RPS6KA1Q15418 735 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 C2CD6Q53TS8 623 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 SLC30A5Q8TAD4 765 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 TMEM40Q8WWA1 233 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 MIEF2Q96C03 454 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 SIX2Q9NPC8 291 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 MCM8Q9UJA3 840 aa12.44□□□□□ -0.42
TNFAIP1-201ENST00000226225 PARP14Q460N5 1801 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 HMGB1P1B2RPK0 211 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 KRIT1O00522 736 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 POLR2BP30876 1174 aaKnown RBP12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 ADCY1Q08828 1119 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 SLC18A3Q16572 532 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 ZACNQ401N2 412 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 FAM228AQ86W67 206 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 STAMBPL1Q96FJ0 436 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 FBXL18Q96ME1 805 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 RPS6KC1Q96S38 1066 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 CTTNBP2NLQ9P2B4 639 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 Q9Y3F1 56 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 KAT6AQ92794 2004 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 ACLYP53396 1101 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 CCDC38Q502W7 563 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 GKAP1Q5VSY0 366 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 SLC27A1Q6PCB7 646 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 TRIM51Q9BSJ1 452 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 TRPV6Q9H1D0 765 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 EVPLQ92817 2033 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 CDH8P55286 799 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 ZNF844Q08AG5 666 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 ANKRD20A8PQ5CZ79 823 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 ARRDC4Q8NCT1 418 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 SYNCQ9H7C4 482 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 GDF3Q9NR23 364 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 AIPL1Q9NZN9 384 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 GTF2IRD1Q9UHL9 959 aa12.43□□□□□ -0.42
TNFAIP1-201ENST00000226225 SSU72P8A0A1W2PR75 194 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 TLR3O15455 904 aaKnown RBP12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 TTI1O43156 1089 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 PQBP1O60828 265 aaKnown RBP12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 MCF2P10911 925 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 RAP1GAPP47736 663 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 AMHR2Q16671 573 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 PREPLQ4J6C6 727 aaPredicted RBP12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 IRF2BP2Q7Z5L9 587 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 WDR49Q8IV35 697 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 FMNL3Q8IVF7 1028 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 ARFGAP2Q8N6H7 521 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 KREMEN1Q96MU8 473 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 ELAC2Q9BQ52 826 aaKnown RBP12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 TMBIM4Q9HC24 238 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 CPSF3Q9UKF6 684 aaKnown RBP12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 ST3GAL5Q9UNP4 418 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 NOC2LQ9Y3T9 749 aaKnown RBP12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 SNX9Q9Y5X1 595 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 UMODL1Q5DID0 1318 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 MAPK13O15264 365 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 SART1O43290 800 aaKnown RBP12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 RASSF9O75901 435 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 RECQL4O94761 1208 aa12.42□□□□□ -0.42
TNFAIP1-201ENST00000226225 HGSNATQ68CP4 663 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms