RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RGS2P41220 211 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 CPT1AP50416 773 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 INHBEP58166 350 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 TAP1Q03518 808 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 RGMBQ6NW40 437 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 CCDC137Q6PK04 289 aaKnown RBP31.51■■■□□ 2.63
PABPN1-201ENST00000216727 IFNL1Q8IU54 200 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 HPDLQ96IR7 371 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 ZIM3Q96PE6 472 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 RUFY1Q96T51 708 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 LRRC19Q9H756 370 aa31.51■■■□□ 2.63
PABPN1-201ENST00000216727 CILPO75339 1184 aa31.5■■■□□ 2.63
PABPN1-201ENST00000216727 IGHA2P01877 340 aa31.5■■■□□ 2.63
PABPN1-201ENST00000216727 POLR2BP30876 1174 aaKnown RBP31.5■■■□□ 2.63
PABPN1-201ENST00000216727 ADAM17P78536 824 aa31.5■■■□□ 2.63
PABPN1-201ENST00000216727 RBP5P82980 135 aa31.5■■■□□ 2.63
PABPN1-201ENST00000216727 TTC27Q6P3X3 843 aa31.5■■■□□ 2.63
PABPN1-201ENST00000216727 SAPCD2Q86UD0 394 aa31.5■■■□□ 2.63
PABPN1-201ENST00000216727 ERICH1Q86X53 443 aa31.5■■■□□ 2.63
PABPN1-201ENST00000216727 SMYD3Q9H7B4 428 aa31.5■■■□□ 2.63
PABPN1-201ENST00000216727 DPP3Q9NY33 737 aa31.5■■■□□ 2.63
PABPN1-201ENST00000216727 CITO14578 2027 aa31.5■■■□□ 2.63
PABPN1-201ENST00000216727 CYP2C9P11712 490 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 FGFR4P22455 802 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 COILP38432 576 aaPredicted RBP31.49■■■□□ 2.63
PABPN1-201ENST00000216727 CDH8P55286 799 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 CCL14Q16627 93 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 SLC27A1Q6PCB7 646 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 STRIP2Q9ULQ0 834 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 DERAQ9Y315 318 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 ECM2O94769 699 aaPredicted RBP31.49■■■□□ 2.63
PABPN1-201ENST00000216727 DNAJC24Q6P3W2 148 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 KATNAL2Q8IYT4 538 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 SOCS4Q8WXH5 440 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 PIK3R5Q8WYR1 880 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 DPH5Q9H2P9 285 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 GJD2Q9UKL4 321 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 AGAP1Q9UPQ3 857 aa31.49■■■□□ 2.63
PABPN1-201ENST00000216727 GOLGA8KD6RF30 607 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 CD19P15391 556 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 PSEN2P49810 448 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 TMEM62Q0P6H9 643 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 PPP1R15BQ5SWA1 713 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 CATSPER4Q7RTX7 472 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 GOLGA6L1Q8N7Z2 621 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 SLC4A11Q8NBS3 891 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 APBA2Q99767 749 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 DARSP14868 501 aaKnown RBP31.48■■■□□ 2.63
PABPN1-201ENST00000216727 CYP2B6P20813 491 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 GBP1P32455 592 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 RPL7AP62424 266 aaKnown RBP31.48■■■□□ 2.63
PABPN1-201ENST00000216727 DENND1BQ6P3S1 775 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 TMEM130Q8N3G9 435 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 TTC39CQ8N584 583 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 C3orf20Q8ND61 904 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 LENG1Q96BZ8 264 aaPredicted RBP31.48■■■□□ 2.63
PABPN1-201ENST00000216727 FAM204AQ9H8W3 233 aa31.48■■■□□ 2.63
PABPN1-201ENST00000216727 ZKSCAN7Q9P0L1 754 aaPredicted RBP31.48■■■□□ 2.63
PABPN1-201ENST00000216727 NPTXRO95502 500 aa31.47■■■□□ 2.63
PABPN1-201ENST00000216727 TAS2R40P59535 323 aa31.47■■■□□ 2.63
PABPN1-201ENST00000216727 PTPN11Q06124 597 aaPredicted RBP31.47■■■□□ 2.63
PABPN1-201ENST00000216727 NOTUMQ6P988 496 aa31.47■■■□□ 2.63
PABPN1-201ENST00000216727 SLCO2A1Q92959 643 aa31.47■■■□□ 2.63
PABPN1-201ENST00000216727 KIF12Q96FN5 646 aa31.47■■■□□ 2.63
PABPN1-201ENST00000216727 TMEM176AQ96HP8 235 aa31.47■■■□□ 2.63
PABPN1-201ENST00000216727 GINS2Q9Y248 185 aa31.47■■■□□ 2.63
PABPN1-201ENST00000216727 SLC10A3P09131 477 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 INCA1Q0VD86 236 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 RUFY4Q6ZNE9 571 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 ELOVL4Q9GZR5 314 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 AP5M1Q9H0R1 490 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 CDHR5Q9HBB8 845 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 GJB6O95452 261 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 EXD1Q8NHP7 514 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 TWNKQ96RR1 684 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 OSMRQ99650 979 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 TRIM31Q9BZY9 425 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 ZDHHC18Q9NUE0 388 aa31.46■■■□□ 2.63
PABPN1-201ENST00000216727 HIC1Q14526 733 aa31.45■■■□□ 2.63
PABPN1-201ENST00000216727 CCDC105Q8IYK2 499 aa31.45■■■□□ 2.63
PABPN1-201ENST00000216727 ZFYVE28Q9HCC9 887 aa31.45■■■□□ 2.63
PABPN1-201ENST00000216727 AXLP30530 894 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 GSCP56915 257 aaPredicted RBP31.44■■■□□ 2.62
PABPN1-201ENST00000216727 MTMR3Q13615 1198 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 SGO2Q562F6 1265 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 LRRC38Q5VT99 294 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 DAB2IPQ5VWQ8 1189 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 DCUN1D2Q6PH85 259 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 SNX27Q96L92 541 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 MCEEQ96PE7 176 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 KATNAL1Q9BW62 490 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 BARX2Q9UMQ3 279 aaPredicted RBP31.44■■■□□ 2.62
PABPN1-201ENST00000216727 RALGAPA2Q2PPJ7 1873 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 HSD17B3P37058 310 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 IRX5P78411 483 aaPredicted RBP31.44■■■□□ 2.62
PABPN1-201ENST00000216727 PTPN20Q4JDL3 420 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 NIPA2Q8N8Q9 360 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 FMO2Q99518 471 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 HMGXB4Q9UGU5 601 aa31.44■■■□□ 2.62
PABPN1-201ENST00000216727 O00370 1275 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms