RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 MORF4L1Q9UBU8 362 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 HMGXB4Q9UGU5 601 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 GINS2Q9Y248 185 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 SLC45A1Q9Y2W3 748 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 GRIN2DO15399 1336 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 HMGB1P1B2RPK0 211 aaPredicted RBP8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 ZEB2O60315 1214 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 PPFIA4O75335 1185 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 IRAK1P51617 712 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 PMS2P54278 862 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 IFFO1Q0D2I5 559 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 GRB14Q14449 540 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 TRIP13Q15645 432 aaPredicted RBP8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 GRIK4Q16099 956 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 UBAP2Q5T6F2 1119 aaKnown RBP8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 DCUN1D2Q6PH85 259 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 ANKRD23Q86SG2 305 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 OR6J1Q8NGC5 347 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 RNF25Q96BH1 459 aaPredicted RBP8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 CCDC114Q96M63 670 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 PTPN18Q99952 460 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 EPB41L4BQ9H329 900 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 GBA2Q9HCG7 927 aaPredicted RBP8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 CALCOCO1Q9P1Z2 691 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 TJP2Q9UDY2 1190 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 IP6K2Q9UHH9 426 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 CEP83Q9Y592 693 aa8.46□□□□□ -1.05
HMGXB4-201ENST00000216106 DOCK3Q8IZD9 2030 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 TMEM191CA6NGB0 347 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 PI4K2BG5E9Z4 385 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 MMP3P08254 477 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 MCF2P10911 925 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 SKOR1P84550 965 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 OGDHQ02218 1023 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 TMEM62Q0P6H9 643 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 KRT71Q3SY84 523 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 MARCH8Q5T0T0 291 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 DENND1BQ6P3S1 775 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 ZNF467Q7Z7K2 595 aaPredicted RBP8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 ERICH1Q86X53 443 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 KIAA0319LQ8IZA0 1049 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 TWNKQ96RR1 684 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 ASIC3Q9UHC3 531 aa8.46□□□□□ -1.06
HMGXB4-201ENST00000216106 F8VP50 259 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 RPS6KA5O75582 802 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 SHBGP04278 402 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 GUCY1A3Q02108 690 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 TNFAIP2Q03169 654 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 POU5F1BQ06416 359 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 KLF1Q13351 362 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 SLC10A6Q3KNW5 377 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 KDM7AQ6ZMT4 941 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 KATNAL2Q8IYT4 538 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 NPLOC4Q8TAT6 608 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 ACSF2Q96CM8 615 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 TINF2Q9BSI4 451 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 BCO2Q9BYV7 579 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 OSBPL8Q9BZF1 889 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 DCLK3Q9C098 648 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 MTRF1LQ9UGC7 380 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 PARP2Q9UGN5 583 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 PCDHGC3Q9UN70 934 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 COL1A2P08123 1366 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 TCRBV5S1A1TA0A578 114 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 GOLGA8SH3BPF8 625 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 TSPAN1O60635 241 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 EIF4BP23588 611 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 POLR2BP30876 1174 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 VPS41P49754 854 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 RAD23BP54727 409 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 YWHAEP62258 255 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 ACVR2BQ13705 512 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 KIZQ2M2Z5 673 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 DUSP28Q4G0W2 176 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 PTPN20Q4JDL3 420 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 KAZNQ674X7 775 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 CCDC25Q86WR0 208 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 IFNLR1Q8IU57 520 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 PABPC3Q9H361 631 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 CYTH4Q9UIA0 394 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 DCDC2CA8MYV0 355 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 EIF3HO15372 352 aaKnown RBP eCLIP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 CELF2O95319 508 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 ATF7P17544 494 aaPredicted RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 GBP1P32455 592 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 MAN1A1P33908 653 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 ADCY2Q08462 1091 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 CALCOCO2Q13137 446 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 TMEM132DQ14C87 1099 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 TXNRD3NBQ6F5E7 133 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 RUFY4Q6ZNE9 571 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 ILDR2Q71H61 639 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 EXD1Q8NHP7 514 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 CXorf38Q8TB03 319 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 MAIP1Q8WWC4 291 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 ART4Q93070 314 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 PARK7Q99497 189 aaKnown RBP8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 ZNF518BQ9C0D4 1074 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 SEMA4AQ9H3S1 761 aa8.45□□□□□ -1.06
HMGXB4-201ENST00000216106 ABHD16BQ9H3Z7 469 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms