RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 DCUN1D1Q96GG9 259 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 MAFGO15525 162 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 TMCC1O94876 653 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 PTPN7P35236 360 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 GALNTL6Q49A17 601 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 MKNK1Q9BUB5 465 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 EIF2AQ9BY44 585 aaKnown RBP14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 DLGAP2Q9P1A6 1054 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 FZD1Q9UP38 647 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 CAPN6Q9Y6Q1 641 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 PBLDP30039 288 aaPredicted RBP14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 HSD17B4P51659 736 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 KRT72Q14CN4 511 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 ATF7IP2Q5U623 682 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 KLHDC7AQ5VTJ3 777 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 PNPLA7Q6ZV29 1317 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 ARHGEF37A1IGU5 675 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 CFAP73A6NFT4 308 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 NDUFS3O75489 264 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 VTNP04004 478 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 SERPINB4P48594 390 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 NUDT2P50583 147 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 IRAK1P51617 712 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 MRPL1Q9BYD6 325 aaKnown RBP14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 ZC4H2Q9NQZ6 224 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 HECW2Q9P2P5 1572 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 PREX2Q70Z35 1606 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 MED24O75448 989 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 TFE3P19532 575 aaPredicted RBP14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 COILP38432 576 aaPredicted RBP14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 PLA2G4AP47712 749 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 THAP11Q96EK4 314 aa14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 MRPS15P82914 257 aaKnown RBP14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 SLC44A2Q8IWA5 706 aaPredicted RBP14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 ABI2Q9NYB9 513 aaPredicted RBP14.22□□□□□ -0.13
TGFBR3-201ENST00000212355 MYO1DO94832 1006 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 NFKBIAP25963 317 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 TTC39BQ5VTQ0 682 aaPredicted RBP14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 ANKRD7Q92527 254 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 MTMR12Q9C0I1 747 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 ABCA8O94911 1581 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 ALKQ9UM73 1620 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 MEI4A8MW99 385 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 TRIM72Q6ZMU5 477 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 SHCBP1Q8NEM2 672 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 KCNH7Q9NS40 1196 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 ZNF70Q9UC06 446 aaPredicted RBP14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 FBXO40Q9UH90 709 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 ARHGAP10A1A4S6 786 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 SLC16A3O15427 465 aaKnown RBP14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 CHRM3P20309 590 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 C11orf63Q6NUN7 778 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 BNIPLQ7Z465 357 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 SLC47A2Q86VL8 602 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 PLD3Q8IV08 490 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 REXO1L1PQ8IX06 675 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 ZNF555Q8NEP9 628 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 SLC20A1Q8WUM9 679 aa14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 ZNF669Q96BR6 464 aaPredicted RBP14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 ZNF512Q96ME7 567 aaPredicted RBP14.21□□□□□ -0.13
TGFBR3-201ENST00000212355 ZSCAN5CA6NGD5 496 aaPredicted RBP14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 SRP72O76094 671 aaKnown RBP14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 EPB42P16452 691 aa14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 CDC25CP30307 473 aa14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 CHSY1Q86X52 802 aa14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 PDS5AQ29RF7 1337 aaKnown RBP14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 PGK2P07205 417 aa14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 DEPDC1Q5TB30 811 aa14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 TPCN2Q8NHX9 752 aa14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 RANBP17Q9H2T7 1088 aaKnown RBP14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 EXOSC4Q9NPD3 245 aaKnown RBP14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 CEP152O94986 1710 aa14.21□□□□□ -0.14
TGFBR3-201ENST00000212355 A0A087X0T9 212 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 TMEM150BA6NC51 233 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 FOXN3O00409 490 aaPredicted RBP14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 FAM228BP0C875 321 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 PON1P27169 355 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 SLC1A1P43005 524 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 HERVK_113P62684 666 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 CAAP1Q9H8G2 361 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 TRPC1P48995 793 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 PRR5LQ6MZQ0 368 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 ARID3BQ8IVW6 561 aaPredicted RBP14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 DYRK4Q9NR20 520 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 PFASO15067 1338 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 HNRNPH1P31943 449 aaKnown RBP14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 PDIA5Q14554 519 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 PTGISQ16647 500 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 TMEM121Q9BTD3 319 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 C10orf88Q9H8K7 445 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 SPHKAPQ2M3C7 1700 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 TNPO2O14787 897 aaKnown RBP14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 ITIH2P19823 946 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 RCN1Q15293 331 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 CCDC142Q17RM4 750 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 SP8Q8IXZ3 490 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 CCSER1Q9C0I3 900 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 PCDHGB4Q9UN71 923 aa14.2□□□□□ -0.14
TGFBR3-201ENST00000212355 TRIM49D1C9J1S8 452 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms