RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 ZBED1O96006 694 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 FCGRTP55899 365 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 ITKQ08881 620 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 P3H1Q32P28 736 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 GPR20Q99678 358 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 ERP44Q9BS26 406 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 PITPNM3Q9BZ71 974 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 NACA2Q9H009 215 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 C10orf88Q9H8K7 445 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 KCND2Q9NZV8 630 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 MYH10P35580 1976 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 ARHGAP42A6NI28 874 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 TCP11X1B4DZS4 312 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 EXTL3O43909 919 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 TROVE2P10155 538 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHPF2-201ENST00000035307 TGFB3P10600 412 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 PHBP35232 272 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 CYP24A1Q07973 514 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 CCDC62Q6P9F0 684 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 CROCCP2Q86T23 111 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 EMC1Q8N766 993 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 PPM1NQ8N819 430 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 DNAAF3Q8N9W5 541 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 ZNF473Q8WTR7 871 aaKnown RBP12.73□□□□□ -0.37
CHPF2-201ENST00000035307 P3H4Q92791 437 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 C2orf40Q9H1Z8 148 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 ZNF112Q9UJU3 913 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 N4BP2Q86UW6 1770 aaPredicted RBP12.73□□□□□ -0.37
CHPF2-201ENST00000035307 ADGRA3Q8IWK6 1321 aa12.73□□□□□ -0.37
CHPF2-201ENST00000035307 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 TOM1L1O75674 476 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 POMCP01189 267 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 MT-ND3P03897 115 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 LCP1P13796 627 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 CYP11B1P15538 503 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 ACAT1P24752 427 aaKnown RBP12.72□□□□□ -0.37
CHPF2-201ENST00000035307 NAMPTP43490 491 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 CDH6P55285 790 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 MYO1EQ12965 1108 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 TMEM132DQ14C87 1099 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 RHOT1Q8IXI2 618 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 PDIK1LQ8N165 341 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 NPLOC4Q8TAT6 608 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 KCNV2Q8TDN2 545 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 RAB21Q9UL25 225 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 MANSC4A6NHS7 340 aaPredicted RBP12.72□□□□□ -0.37
CHPF2-201ENST00000035307 ADCY3O60266 1144 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 PLA2G6O60733 806 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 CAND2O75155 1236 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 RFC5P40937 340 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 ADCY2Q08462 1091 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 SREBF2Q12772 1141 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 GPAT2Q6NUI2 795 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 PALB2Q86YC2 1186 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 HIPK4Q8NE63 616 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 MAML1Q92585 1016 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 LPPQ93052 612 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 FAF2Q96CS3 445 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 SLC13A1Q9BZW2 595 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 SEMA4AQ9H3S1 761 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 GOLGA2P5Q9HBQ8 144 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 MAP3K20Q9NYL2 800 aaKnown RBP12.72□□□□□ -0.37
CHPF2-201ENST00000035307 CASTOR2A6NHX0 329 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 IGF2BP3O00425 579 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHPF2-201ENST00000035307 STRNO43815 780 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 TJP3O95049 919 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 SMPD1P17405 629 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 MAGEA9P43362 315 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 DEFB128Q7Z7B8 93 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 OSBPL8Q9BZF1 889 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 WNT8AQ9H1J5 351 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 TMEM8AQ9HCN3 771 aa12.72□□□□□ -0.37
CHPF2-201ENST00000035307 TXNDC9O14530 226 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 OGTO15294 1046 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 NOVP48745 357 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 EIF3BP55884 814 aaKnown RBP12.71□□□□□ -0.37
CHPF2-201ENST00000035307 FSCN1Q16658 493 aaKnown RBP12.71□□□□□ -0.37
CHPF2-201ENST00000035307 ACOT1Q86TX2 421 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 TMEM192Q8IY95 271 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 SEMA4DQ92854 862 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 RBM15Q96T37 977 aaKnown RBP eCLIP12.71□□□□□ -0.372e-7■■■■■ 34.7
CHPF2-201ENST00000035307 ISCUQ9H1K1 167 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 SYNPO2Q9UMS6 1093 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 SCINQ9Y6U3 715 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 ZBBXA8MT70 800 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 TREHO43280 583 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 CPP00450 1065 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 MMP14P50281 582 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 ITGA8P53708 1063 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 MAP7D3Q8IWC1 876 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 KIF2BQ8N4N8 673 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 AGR3Q8TD06 166 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 VIPAS39Q9H9C1 493 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 XPNPEP3Q9NQH7 507 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 NAV1Q8NEY1 1877 aa12.71□□□□□ -0.37
CHPF2-201ENST00000035307 C2CD2LO14523 706 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 CREB3O43889 395 aa12.71□□□□□ -0.38
CHPF2-201ENST00000035307 PQBP1O60828 265 aaKnown RBP12.71□□□□□ -0.38
CHPF2-201ENST00000035307 PHF2O75151 1096 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms