RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 DBF4BQ8NFT6 615 aa11.25□□□□□ -0.61
CD4-201ENST00000011653 TAF4BQ92750 862 aa11.25□□□□□ -0.61
CD4-201ENST00000011653 ARL8AQ96BM9 186 aa11.25□□□□□ -0.61
CD4-201ENST00000011653 ZIM3Q96PE6 472 aa11.25□□□□□ -0.61
CD4-201ENST00000011653 HIPK3Q9H422 1215 aa11.25□□□□□ -0.61
CD4-201ENST00000011653 FAM105AQ9NUU6 356 aa11.25□□□□□ -0.61
CD4-201ENST00000011653 ADAMTS1Q9UHI8 967 aa11.25□□□□□ -0.61
CD4-201ENST00000011653 NFU1Q9UMS0 254 aa11.25□□□□□ -0.61
CD4-201ENST00000011653 PCDHGC5Q9Y5F6 944 aa11.25□□□□□ -0.61
CD4-201ENST00000011653 A0A087WUV0 522 aaPredicted RBP11.24□□□□□ -0.61
CD4-201ENST00000011653 KIAA0391O15091 583 aaKnown RBP11.24□□□□□ -0.61
CD4-201ENST00000011653 CYP26A1O43174 497 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 GLI1P08151 1106 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 CARSP49589 748 aaKnown RBP11.24□□□□□ -0.61
CD4-201ENST00000011653 TNNC1P63316 161 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 NOP14P78316 857 aaKnown RBP11.24□□□□□ -0.61
CD4-201ENST00000011653 UBXN11Q5T124 520 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 DNAJC14Q6Y2X3 702 aaPredicted RBP11.24□□□□□ -0.61
CD4-201ENST00000011653 SLC39A5Q6ZMH5 540 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 FAM126BQ8IXS8 530 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 LMO3Q8TAP4 145 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 HASPINQ8TF76 798 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 IFT81Q8WYA0 676 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 MCOLN1Q9GZU1 580 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 NUB1Q9Y5A7 615 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 EVI5O60447 810 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 IGFBP6P24592 240 aaPredicted RBP11.24□□□□□ -0.61
CD4-201ENST00000011653 ZNF699Q32M78 642 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 DCAF4L1Q3SXM0 396 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 MEI1Q5TIA1 1274 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 TADA2BQ86TJ2 420 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 C1orf127Q8N9H9 656 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 SMG8Q8ND04 991 aaKnown RBP11.24□□□□□ -0.61
CD4-201ENST00000011653 KREMEN1Q96MU8 473 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 RPS6KC1Q96S38 1066 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 KRT12Q99456 494 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 APOBEC3GQ9HC16 384 aaKnown RBP11.24□□□□□ -0.61
CD4-201ENST00000011653 AIPL1Q9NZN9 384 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 A0A087X0T9 212 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 FAM228BP0C875 321 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 ITGA4P13612 1032 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 SCP2P22307 547 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 SCNN1GP51170 649 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 NKX3-2P78367 333 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 PDE4DIPQ5VU43 2346 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 WDR49Q8IV35 697 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 WHAMMQ8TF30 809 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 PLCB1Q9NQ66 1216 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 DPP3Q9NY33 737 aa11.24□□□□□ -0.61
CD4-201ENST00000011653 CASTOR2A6NHX0 329 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 MAPK13O15264 365 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 GRM5P41594 1212 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 STAT1P42224 750 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 MGAT3Q09327 533 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 TRIM71Q2Q1W2 868 aaKnown RBP11.23□□□□□ -0.61
CD4-201ENST00000011653 TMEM270Q6UE05 265 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 MREGQ8N565 214 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 PCDHB4Q9Y5E5 795 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 ESYT3A0FGR9 886 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 TLR3O15455 904 aaKnown RBP11.23□□□□□ -0.61
CD4-201ENST00000011653 SELPP16109 830 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 IFI16Q16666 785 aaKnown RBP11.23□□□□□ -0.61
CD4-201ENST00000011653 C10orf76Q5T2E6 689 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 APBB1IPQ7Z5R6 666 aaPredicted RBP11.23□□□□□ -0.61
CD4-201ENST00000011653 TMCO2Q7Z6W1 182 aaPredicted RBP11.23□□□□□ -0.61
CD4-201ENST00000011653 PHLDB2Q86SQ0 1253 aa11.23□□□□□ -0.61
CD4-201ENST00000011653 SMIM28A0A1B0GU29 152 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 GTPBP10A4D1E9 387 aaKnown RBP11.22□□□□□ -0.61
CD4-201ENST00000011653 ZSCAN5CA6NGD5 496 aaPredicted RBP11.22□□□□□ -0.61
CD4-201ENST00000011653 F8VZ95 297 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 CPP00450 1065 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 KRT14P02533 472 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 FGFR1P11362 822 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 MNX1P50219 401 aaPredicted RBP11.22□□□□□ -0.61
CD4-201ENST00000011653 PTK2Q05397 1052 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 BFSP2Q13515 415 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 PTPROQ16827 1216 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 LRRC26Q2I0M4 334 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 TTC19Q6DKK2 380 aaPredicted RBP11.22□□□□□ -0.61
CD4-201ENST00000011653 ARMCX6Q7L4S7 300 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 PACS2Q86VP3 889 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 IQCKQ8N0W5 287 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 SLC20A1Q8WUM9 679 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 PACSIN1Q9BY11 444 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 CHORDC1Q9UHD1 332 aaPredicted RBP11.22□□□□□ -0.61
CD4-201ENST00000011653 PACSIN2Q9UNF0 486 aaPredicted RBP11.22□□□□□ -0.61
CD4-201ENST00000011653 SNX9Q9Y5X1 595 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 FAM169AQ9Y6X4 670 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 MYO9BQ13459 2157 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 BTNL10A8MVZ5 291 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 CES2O00748 559 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 NBNO60934 754 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 CSPG5O95196 566 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 FAM153BP0C7A2 387 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 GJA8P48165 433 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 CDK7P50613 346 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 MFAP3P55082 362 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 FAAP100Q0VG06 881 aa11.22□□□□□ -0.61
CD4-201ENST00000011653 PDCLQ13371 301 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms