RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Lcn6A2AJB9 181 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gm8879F6R3J9 157 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 PolgP54099 1218 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Atp13a3Q5XF89 1219 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 FntaQ61239 377 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Msi2Q920Q6 346 aaKnown RBP16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Sugt1Q9CX34 336 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Chordc1Q9D1P4 331 aaKnown RBP16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Rhox3cA2AWM0 215 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Rhox3hL7MU37 215 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Aff1O88573 1216 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Glud1P26443 558 aaKnown RBP16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pdcd2P46718 343 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Rhox3aQ4TU90 215 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Best3Q6H1V1 669 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 LrgukQ9D5S7 820 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Fam122aQ9DB52 284 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Arih1Q9Z1K5 555 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ankfn1A0A140LIW7 1083 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Zfand4D3Z3C6 739 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Hcn2O88703 863 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Sdr16c6Q05A13 316 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pcgf5Q3UK78 256 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Zmym6Q8BS54 1249 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Xpo7Q9EPK7 1087 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Cog8Q9JJA2 640 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ppp3ccP48455 513 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Fam198aQ3UY90 562 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Sarm1Q6PDS3 724 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Mxd3Q80US8 206 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Lrrc1Q80VQ1 524 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Llgl1Q80Y17 1036 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Fbxl21Q8BFZ4 434 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Mettl13Q91YR5 698 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Thg1lQ9CY52 298 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gabbr1Q9WV18 960 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Slc16a6B1AT66 607 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Serpinh1P19324 417 aaKnown RBP16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Trim75Q3UWZ0 467 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 ItgadQ3V0T4 1168 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ddx3xQ62167 662 aaKnown RBP16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Aldh5a1Q8BWF0 523 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 HlcsQ920N2 722 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Hars2Q99KK9 505 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Spata5Q3UMC0 893 aaKnown RBP16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Arhgap44Q5SSM3 814 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 RbakQ8BQC8 711 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Col23a1Q8K4G2 532 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 ChiaQ91XA9 473 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ttc30a1Q99J38 664 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Micu3Q9CTY5 523 aa16.48■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Flvcr1B2RXV4 560 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gm1141B9EJU1 475 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Papd7Q6PB75 542 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 MyripQ8K3I4 856 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Mxra8Q9DBV4 442 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Akr1b10G5E895 316 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gm379J3QQ19 296 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Aak1Q3UHJ0 959 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Flot2Q60634 428 aaKnown RBP16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Sun2Q8BJS4 731 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Slc25a24Q8BMD8 475 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Wrap53Q8VC51 532 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Prpf4Q9DAW6 521 aaKnown RBP16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Hmgxb3G3X9M3 1254 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Fam89aQ14BJ1 175 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Nipa1Q8BHK1 323 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Olfml3Q8BK62 406 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Eif2b5Q8CHW4 717 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pcdha3Q91Y16 942 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Hsd17b4P51660 735 aaKnown RBP16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Cdo1P60334 200 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 NogP97466 232 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pdp2Q504M2 532 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Olfr392Q7TRX6 312 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 BfarQ8R079 450 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Zfp566Q8VCI1 386 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Snx9Q91VH2 595 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pcdhgc5Q91XW9 944 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Tnip2Q99JG7 430 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Kif19Q99PT9 997 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Igf2bp3Q9CPN8 579 aaKnown RBP16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ercc4Q9QZD4 917 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Vmn2r1O70410 912 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Afg1lQ3V384 480 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pcsk9Q80W65 694 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Depdc1aQ8CIG0 804 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ascc2Q91WR3 749 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 LrmdaQ9D9B4 229 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Usp29Q9ES63 869 aa16.47■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Tmem131lQ3U3D7 1597 aa16.46■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Zfp558E9Q1J0 407 aa16.46■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Anxa8O35640 327 aa16.46■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Hmx1O70218 332 aa16.46■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Rbbp7Q60973 425 aaKnown RBP16.46■□□□□ 0.23
Clcn3-203ENSMUST00000093490 TdrkhQ80VL1 560 aa16.46■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Slitrk1Q810C1 696 aa16.46■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gprc5cQ8K3J9 440 aa16.46■□□□□ 0.23
Clcn3-203ENSMUST00000093490 4930469K13RikA0A286YDB2 92 aa16.46■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gm15448F6PZL4 682 aa16.46■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms