RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Gm16432A0A0A6YXX9 775 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Arhgap4B1AUY3 965 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Mterf1bB9EJ57 379 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 PolP11369 1281 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 CtsaP16675 474 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Htr7P32304 448 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 AcadmP45952 421 aaKnown RBP8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Csrp2P97314 193 aaKnown RBP8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 SPINDOCQ05AH6 381 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Fam184bQ0KK56 942 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Dvl2Q60838 736 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Zfp341Q6PGC9 846 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Gramd1bQ80TI0 738 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Tmem266Q8BZB3 538 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 ZxdcQ8C8V1 858 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Mterf1aQ8CHZ9 379 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Pcdhb5Q91XZ5 792 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Sh2d3cQ9QZS8 854 aa8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Smg6P61406 1418 aaKnown RBP8.35□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 FscbA1EGX6 1074 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 4930435E12RikA6X8Z9 381 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Dcdc2bF7BCK0 340 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Tspan15F7BWT7 294 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Sh3pxd2aO89032 1124 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Gpr12P35412 334 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Gucy2eP52785 1108 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 PrkcgP63318 697 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Cnnm1Q0GA42 951 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Esyt1Q3U7R1 1092 aaKnown RBP8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Il17raQ60943 864 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Itih2Q61703 946 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Kiaa0753Q6A000 959 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 BocQ6AZB0 1110 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 DdiasQ6NZG4 898 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Fbxl19Q6PB97 674 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 PapolgQ6PCL9 739 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Camsap3Q80VC9 1252 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Otop1Q80VM9 600 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Tti2Q8BGV4 512 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Rnf208Q8K0W3 265 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 AY761184Q9D848 116 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Dnajc10Q9DC23 793 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Gdf2Q9WV56 428 aa8.34□□□□□ -1.07
Ccdc54-201ENSMUST00000062439 Parp14Q2EMV9 1817 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 ClspnQ80YR7 1315 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 PnisrA2AJT4 805 aaKnown RBP8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Pex10B1AUE5 324 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ptchd4B9EKX1 904 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Susd1E9Q3H4 752 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Xkr6E9Q6C8 638 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Tacr1P30548 407 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Slc12a1P55014 1095 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 HarsQ61035 509 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Egfl8Q6GUQ1 293 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Exoc3Q6KAR6 755 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Echs1Q8BH95 290 aaKnown RBP8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Wdr3Q8BHB4 942 aaKnown RBP8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Nadk2Q8C5H8 452 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Mfsd6lQ8R3N2 586 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Olfr654Q8VF27 341 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 CenppQ9CZ92 286 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ptpn23Q6PB44 1692 aa8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 IbtkQ6ZPR6 1352 aaKnown RBP8.33□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Prr32A2AFE9 284 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gnai1B2RSH2 354 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gm10197F6QEY5 67 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gnat2P50149 354 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Slc1a5P51912 553 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Slc8a1P70414 970 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 PrkcqQ02111 707 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Ric8aQ3TIR3 530 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Brd9Q3UQU0 596 aaKnown RBP8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Krt40Q6IFX3 439 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Znf532Q6NXK2 1036 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Hook2Q7TMK6 716 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 JkampQ8BI36 311 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Pm20d1Q8C165 503 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 NaxeQ8K4Z3 282 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Pank3Q8R2W9 370 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Spon1Q8VCC9 807 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Pcdha10Q91Y20 946 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Adgre4Q91ZE5 689 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gnai3Q9DC51 354 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Rgs17Q9QZB0 210 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Tagln3Q9R1Q8 199 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Slfn14V9GXG1 899 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Slit1Q80TR4 1531 aa8.32□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Slc18b1D3Z5L6 459 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Prss56F2YMG0 604 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gm10354K7N6A0 256 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Speer4eK7N6S8 255 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gm3755K7N743 167 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Capn1O35350 713 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 St8sia2O35696 375 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 EgfP01132 1217 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 AppP12023 770 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Wnt3aP27467 352 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Gjb1P28230 283 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Icam2P35330 277 aa8.31□□□□□ -1.08
Ccdc54-201ENSMUST00000062439 Slc16a1P53986 493 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms