RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Iars2Q8BIJ6 1012 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 GanQ8CA72 597 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cnot3Q8K0V4 751 aaKnown RBP10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rabl3Q9D4V7 236 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ten1Q9D7K2 161 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cyp39a1Q9JKJ9 470 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mst1rQ62190 1378 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Krt42Q6IFX2 452 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 E2f7Q6S7F2 904 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ddhd1Q80YA3 547 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Slc6a15Q8BG16 729 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trub2Q91WG3 331 aaKnown RBP10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mtmr2Q9Z2D1 643 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Bmp2P21274 394 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Psma2P49722 234 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gstt2Q61133 244 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nrde2Q80XC6 1172 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pcdh18Q8VHR0 1134 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Micu3Q9CTY5 523 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sgf29Q9DA08 293 aaKnown RBP10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Znf654Q9DAU9 571 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Chmp2aQ9DB34 222 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Hebp1Q9R257 190 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ap4s1Q9WVL1 144 aa10.58□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ace3D0G895 737 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zbed6D2EAC2 980 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Plk1Q07832 603 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zbed4Q80WQ9 1168 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nup107Q8BH74 926 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sp8Q8BMJ8 486 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 AmotQ8VHG2 1126 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pcdha9Q91Y11 979 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cdc42ep4Q9JM96 349 aaKnown RBP10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Neu2Q9JMH3 379 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Deaf1Q9Z1T5 566 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ppp1r36D3Z0R2 411 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 A530032D15RikE9Q422 215 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Olfr292F8VQ84 308 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rc3h1Q4VGL6 1130 aaKnown RBP10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sdf4Q61112 361 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mysm1Q69Z66 819 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 RubcnQ80U62 956 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ankrd23Q812A3 306 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Slc25a24Q8BMD8 475 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tmem145Q8C4U2 746 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tbc1d10cQ8C9V1 444 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 MlphQ91V27 590 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Atp5dQ9D3D9 168 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mad2l2Q9D752 211 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nphs1Q9QZS7 1256 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 DselQ0VBN2 1207 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tbc1d10bQ8BHL3 798 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Klhl36Q8R124 613 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Stx18Q8VDS8 334 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Mcrs1Q99L90 462 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 PpihQ9D868 188 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cyp4f14Q9EP75 524 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tob2Q9JM55 345 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Tns3Q5SSZ5 1440 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rgs2O08849 211 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sipa1P46062 1037 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Arhgap45Q3TBD2 1116 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Cog4Q8R1U1 785 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zcchc11B2RX14 1644 aaKnown RBP10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Aox3G3X982 1335 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 ZufspQ3T9Z9 577 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pdap1Q3UHX2 181 aaKnown RBP10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Ag2Q3UPL5 249 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rbl2Q64700 1135 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Castor1Q9CWQ8 331 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nme3Q9WV85 169 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 OatP29758 439 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 PtpreP49446 699 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Faf2Q3TDN2 445 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 9130409I23RikQ3TS87 320 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Akap7Q7TN79 314 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Q80WR5 230 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 EmsyQ8BMB0 1264 aaKnown RBP10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zcchc18Q8VD24 393 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Depdc7Q91WS7 511 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Hormad1Q9D5T7 392 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Trpc4apQ9JLV2 797 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Psma4Q9R1P0 261 aa10.57□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm28961A0A087WPA5 222 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Gm21858A0A087WQ24 222 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pcdh9F8VPK8 1237 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rfpl4bJ3QPR6 266 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Dnajb6O54946 365 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pou5f1P20263 352 aaKnown RBP10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 GckP52792 465 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Kcna2P63141 499 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Rfx4Q7TNK1 735 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Sept9Q80UG5 583 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Zfyve16Q80U44 1528 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Nrxn1Q9CS84 1514 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Akap17bA2A3V1 959 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 SgczQ8BX51 311 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Strip1Q8C079 837 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Pkn3Q8K045 878 aa10.56□□□□□ -0.72
Ubr1-201ENSMUST00000028728 Upb1Q8VC97 393 aa10.56□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms