RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B CDC28P00546 298 aaKnown RBP-1.08□□□□□ -2.58
snR39BsnR39B KIN28P06242 306 aa-1.08□□□□□ -2.58
snR39BsnR39B SPT3P06844 337 aa-1.08□□□□□ -2.58
snR39BsnR39B RPS22AP0C0W1 130 aaKnown RBP-1.08□□□□□ -2.58
snR39BsnR39B OM45P16547 393 aa-1.08□□□□□ -2.58
snR39BsnR39B YCR023CP25351 611 aa-1.08□□□□□ -2.58
snR39BsnR39B ADE1P27616 306 aa-1.08□□□□□ -2.58
snR39BsnR39B OCH1P31755 480 aa-1.08□□□□□ -2.58
snR39BsnR39B FAR7P43592 221 aa-1.08□□□□□ -2.58
snR39BsnR39B MRPL50P53724 139 aa-1.08□□□□□ -2.58
snR39BsnR39B PDR17P53844 350 aa-1.08□□□□□ -2.58
snR39BsnR39B YNL134CP53912 376 aaKnown RBP-1.08□□□□□ -2.58
snR39BsnR39B FCY1Q12178 158 aa-1.08□□□□□ -2.58
snR39BsnR39B RPS22BQ3E7Y3 130 aaKnown RBP-1.08□□□□□ -2.58
snR39BsnR39B FMP27Q06179 2628 aa-1.09□□□□□ -2.58
snR39BsnR39B SEC4P07560 215 aaKnown RBP-1.09□□□□□ -2.58
snR39BsnR39B YPK2P18961 677 aa-1.09□□□□□ -2.58
snR39BsnR39B PRE1P22141 198 aaKnown RBP-1.09□□□□□ -2.58
snR39BsnR39B PAM17P36147 197 aa-1.09□□□□□ -2.58
snR39BsnR39B YHR140WP38842 239 aa-1.09□□□□□ -2.58
snR39BsnR39B POG1P40473 351 aa-1.09□□□□□ -2.58
snR39BsnR39B CUP9P41817 306 aa-1.09□□□□□ -2.58
snR39BsnR39B SOL1P50278 321 aa-1.09□□□□□ -2.58
snR39BsnR39B NSA1P53136 463 aaPredicted RBP-1.09□□□□□ -2.58
snR39BsnR39B AVO2Q04749 426 aa-1.09□□□□□ -2.58
snR39BsnR39B GGA1Q06336 557 aa-1.09□□□□□ -2.58
snR39BsnR39B NAT3Q06504 195 aa-1.09□□□□□ -2.58
snR39BsnR39B CFT1Q06632 1357 aaKnown RBP-1.09□□□□□ -2.58
snR39BsnR39B PTM1P32857 523 aa-1.1□□□□□ -2.59
snR39BsnR39B APS1P35181 156 aa-1.1□□□□□ -2.59
snR39BsnR39B CIN5P40917 295 aa-1.1□□□□□ -2.59
snR39BsnR39B ARP3P47117 449 aaKnown RBP-1.1□□□□□ -2.59
snR39BsnR39B YNL122CP53921 115 aaPredicted RBP-1.1□□□□□ -2.59
snR39BsnR39B YMR099CQ03161 297 aaKnown RBP-1.1□□□□□ -2.59
snR39BsnR39B RPL24AP04449 155 aaKnown RBP-1.11□□□□□ -2.59
snR39BsnR39B URA6P15700 204 aa-1.11□□□□□ -2.59
snR39BsnR39B ERG10P41338 398 aaKnown RBP-1.11□□□□□ -2.59
snR39BsnR39B SER2P42941 309 aa-1.11□□□□□ -2.59
snR39BsnR39B BXI1P48558 297 aa-1.11□□□□□ -2.59
snR39BsnR39B SHH3Q04487 196 aa-1.11□□□□□ -2.59
snR39BsnR39B RRT8Q08219 342 aa-1.11□□□□□ -2.59
snR39BsnR39B YHR214C-EQ8TGK0 99 aa-1.11□□□□□ -2.59
snR39BsnR39B URA2P07259 2214 aaKnown RBP-1.11□□□□□ -2.59
snR39BsnR39B GCN1P33892 2672 aaKnown RBP-1.12□□□□□ -2.59
snR39BsnR39B YLR422WQ06409 1932 aa-1.12□□□□□ -2.59
snR39BsnR39B TIR1P10863 254 aa-1.12□□□□□ -2.59
snR39BsnR39B STE18P18852 110 aa-1.12□□□□□ -2.59
snR39BsnR39B RPO26P20435 155 aa-1.12□□□□□ -2.59
snR39BsnR39B CKS1P20486 150 aaKnown RBP-1.12□□□□□ -2.59
snR39BsnR39B PDS1P40316 373 aaPredicted RBP-1.12□□□□□ -2.59
snR39BsnR39B RFC2P40348 353 aa-1.12□□□□□ -2.59
snR39BsnR39B GPI14P47088 403 aaKnown RBP-1.12□□□□□ -2.59
snR39BsnR39B CCC1P47818 322 aa-1.12□□□□□ -2.59
snR39BsnR39B COG5P53951 403 aa-1.12□□□□□ -2.59
snR39BsnR39B YHP1Q04116 353 aa-1.12□□□□□ -2.59
snR39BsnR39B HNT1Q04344 158 aaKnown RBP-1.12□□□□□ -2.59
snR39BsnR39B POL2P21951 2222 aaKnown RBP-1.12□□□□□ -2.59
snR39BsnR39B LAA1P39526 2014 aa-1.13□□□□□ -2.59
snR39BsnR39B BNI1P41832 1953 aa-1.13□□□□□ -2.59
snR39BsnR39B PET100P38958 111 aa-1.13□□□□□ -2.59
snR39BsnR39B RMD6P39975 231 aa-1.13□□□□□ -2.59
snR39BsnR39B NSE4P43124 402 aa-1.13□□□□□ -2.59
snR39BsnR39B LIA1P47120 325 aaKnown RBP-1.13□□□□□ -2.59
snR39BsnR39B EGD1Q02642 157 aaKnown RBP-1.13□□□□□ -2.59
snR39BsnR39B HRD1Q08109 551 aa-1.13□□□□□ -2.59
snR39BsnR39B YMR030W-AQ3E760 96 aa-1.13□□□□□ -2.59
snR39BsnR39B YIL002W-AQ3E7Z5 69 aa-1.13□□□□□ -2.59
snR39BsnR39B RIF1P29539 1916 aa-1.13□□□□□ -2.59
snR39BsnR39B HAP2P06774 265 aa-1.14□□□□□ -2.59
snR39BsnR39B SNF4P12904 322 aa-1.14□□□□□ -2.59
snR39BsnR39B CLG1P35190 452 aa-1.14□□□□□ -2.59
snR39BsnR39B CCS1P40202 249 aaKnown RBP-1.14□□□□□ -2.59
snR39BsnR39B YMR253CQ04835 414 aa-1.14□□□□□ -2.59
snR39BsnR39B FAS2P19097 1887 aaKnown RBP-1.14□□□□□ -2.59
snR39BsnR39B IDP1P21954 428 aaKnown RBP-1.15□□□□□ -2.59
snR39BsnR39B MAK31P23059 88 aa-1.15□□□□□ -2.59
snR39BsnR39B MGT1P26188 188 aa-1.15□□□□□ -2.59
snR39BsnR39B BMH2P34730 273 aaKnown RBP-1.15□□□□□ -2.59
snR39BsnR39B CUE1P38428 203 aa-1.15□□□□□ -2.59
snR39BsnR39B BRR6P53062 197 aa-1.15□□□□□ -2.59
snR39BsnR39B YMR321CQ04898 105 aa-1.15□□□□□ -2.59
snR39BsnR39B DYN3Q04949 312 aa-1.15□□□□□ -2.59
snR39BsnR39B DGK1Q12382 290 aa-1.15□□□□□ -2.59
snR39BsnR39B ADF1Q2V2Q1 113 aa-1.15□□□□□ -2.59
snR39BsnR39B MYO1P08964 1928 aa-1.15□□□□□ -2.59
snR39BsnR39B MAG1P22134 296 aaKnown RBP-1.16□□□□□ -2.6
snR39BsnR39B YCR090CP25654 182 aaKnown RBP-1.16□□□□□ -2.6
snR39BsnR39B SPC25P40014 221 aa-1.16□□□□□ -2.6
snR39BsnR39B GAT4P40569 121 aa-1.16□□□□□ -2.6
snR39BsnR39B EMC2P47133 292 aaKnown RBP-1.16□□□□□ -2.6
snR39BsnR39B FYV6P53913 173 aa-1.16□□□□□ -2.6
snR39BsnR39B FMN1Q03778 218 aa-1.16□□□□□ -2.6
snR39BsnR39B GRE1Q08969 168 aa-1.16□□□□□ -2.6
snR39BsnR39B YOR015WQ12169 119 aa-1.16□□□□□ -2.6
snR39BsnR39B YOL107WQ12239 342 aa-1.16□□□□□ -2.6
snR39BsnR39B MRPL25P23369 157 aa-1.17□□□□□ -2.6
snR39BsnR39B MRPL37P36532 105 aa-1.17□□□□□ -2.6
snR39BsnR39B YBR027CP38220 110 aa-1.17□□□□□ -2.6
snR39BsnR39B YER134CP40081 178 aa-1.17□□□□□ -2.6
snR39BsnR39B MVB12P42939 101 aa-1.17□□□□□ -2.6
Retrieved 100 of 5,963 RNA–protein pairs in 71.4 ms