RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	YDL218W	Q07629	317 aa		4.65	□□□□□ -1.66
HFI1	YPL254W	YOR186W	Q08560	144 aa		4.65	□□□□□ -1.66
HFI1	YPL254W	SRL1	Q08673	210 aa		4.65	□□□□□ -1.66
HFI1	YPL254W	PRR2	Q12310	699 aa		4.65	□□□□□ -1.66
HFI1	YPL254W	SME1	Q12330	94 aa	Predicted RBP	4.65	□□□□□ -1.66
HFI1	YPL254W	AGC1	Q12482	902 aa		4.65	□□□□□ -1.66
HFI1	YPL254W	YOR192C-C	Q3E736	78 aa		4.65	□□□□□ -1.66
HFI1	YPL254W	YLR365W	Q7LIF2	110 aa		4.65	□□□□□ -1.66
HFI1	YPL254W	RPS16A	P0CX51	143 aa	Known RBP	4.64	□□□□□ -1.67
HFI1	YPL254W	RPS16B	P0CX52	143 aa	Known RBP	4.64	□□□□□ -1.67
HFI1	YPL254W	YCR043C	P25361	127 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	CDC50	P25656	391 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	PEX4	P29340	183 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	UPS2	P35200	230 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	MRPL28	P36527	147 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	SWD3	P38123	315 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	SLM6	P38343	150 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	YBR292C	P38357	123 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	PRS2	P38620	318 aa	Known RBP	4.64	□□□□□ -1.67
HFI1	YPL254W	RSM23	Q01163	450 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	CTR3	Q06686	241 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	PML1	Q07930	204 aa	Predicted RBP	4.64	□□□□□ -1.67
HFI1	YPL254W	HNT3	Q08702	217 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	REX3	Q12090	404 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	FCY22	Q12119	530 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	FRE8	Q12209	686 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	ATG5	Q12380	294 aa		4.64	□□□□□ -1.67
HFI1	YPL254W	PAR32	Q12515	295 aa	Known RBP	4.64	□□□□□ -1.67
HFI1	YPL254W	BRR2	P32639	2163 aa	Known RBP	4.64	□□□□□ -1.67
HFI1	YPL254W	CDC7	P06243	507 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	SPS4	P09937	338 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	YHR214C-D	P0CX93	97 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	YFL068W	P0CX99	160 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	YLL066W-A	P0CY00	160 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	YLL067W-A	P0CY01	160 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	MRPS9	P38120	278 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	PHS1	P40857	217 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	RTS2	P40962	232 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	RPA34	P47006	233 aa	Predicted RBP	4.63	□□□□□ -1.67
HFI1	YPL254W	MGA1	P53050	456 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	HHT1	P61830	136 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	SDC1	Q03323	175 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	CGI121	Q03705	181 aa	Known RBP	4.63	□□□□□ -1.67
HFI1	YPL254W	YDR286C	Q05530	114 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	YOR376W	Q08900	122 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	IZH2	Q12442	317 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	CMC2	Q3E7A4	109 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	YPR108W-A	Q3E7B3	70 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	YBR126W-A	Q8TGU7	68 aa		4.63	□□□□□ -1.67
HFI1	YPL254W	FAS1	P07149	2051 aa	Known RBP	4.63	□□□□□ -1.67
HFI1	YPL254W	BEM2	P39960	2167 aa	Known RBP	4.63	□□□□□ -1.67
HFI1	YPL254W	FLO9	P39712	1322 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	BGL2	P15703	313 aa	Known RBP	4.62	□□□□□ -1.67
HFI1	YPL254W	ERV1	P27882	189 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	AHT1	P29589	182 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	ALK2	P32789	676 aa	Predicted RBP	4.62	□□□□□ -1.67
HFI1	YPL254W	AVT5	P38176	459 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	YBR096W	P38256	230 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	YPT31	P38555	223 aa	Known RBP	4.62	□□□□□ -1.67
HFI1	YPL254W	PCP1	P53259	346 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	OCA2	P53949	197 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	YLR118C	Q12354	227 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	MPD1	Q12404	318 aa	Known RBP	4.62	□□□□□ -1.67
HFI1	YPL254W	RPL25	P04456	142 aa	Known RBP	4.62	□□□□□ -1.67
HFI1	YPL254W	PDX1	P16451	410 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	SCM4	P32564	187 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	UTH1	P36135	365 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	YER079W	P40052	210 aa	Known RBP	4.62	□□□□□ -1.67
HFI1	YPL254W	LSM4	P40070	187 aa	Known RBP	4.62	□□□□□ -1.67
HFI1	YPL254W	YIL169C	P40442	995 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	HIT1	P46973	164 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	DUO1	P53168	247 aa	Known RBP	4.62	□□□□□ -1.67
HFI1	YPL254W	PAU4	P53427	120 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	RSM10	Q03201	203 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	AVO2	Q04749	426 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	ERV2	Q12284	196 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	RAX2	Q12465	1220 aa		4.62	□□□□□ -1.67
HFI1	YPL254W	PAU1	P0CE88	120 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	PAU14	P0CE89	120 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	PAU6	P0CE90	120 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	PAU18	P0CE91	120 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	PAU8	P0CE92	120 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	PAU11	P0CE93	120 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	MSI1	P13712	422 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	SEC62	P21825	274 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	DEG1	P31115	442 aa	Known RBP	4.61	□□□□□ -1.67
HFI1	YPL254W	SHB17	P36136	271 aa	Known RBP	4.61	□□□□□ -1.67
HFI1	YPL254W	TRS20	P38334	175 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	PAU13	P38725	120 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	ERG25	P53045	309 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	CYT2	Q00873	224 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	PAU10	Q03050	120 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	NUP53	Q03790	475 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	YDR387C	Q04162	555 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	CUE4	Q04201	117 aa	Predicted RBP	4.61	□□□□□ -1.67
HFI1	YPL254W	DPB4	Q04603	196 aa	Known RBP	4.61	□□□□□ -1.67
HFI1	YPL254W	YMR254C	Q04838	102 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	PAU20	Q08322	120 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	YPL264C	Q08980	353 aa		4.61	□□□□□ -1.67
HFI1	YPL254W	PAU9	Q3E770	120 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms