RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W SVP26P38869 228 aa1.28□□□□□ -2.2
BRO1YPL084W YFR054CP43622 192 aa1.28□□□□□ -2.2
BRO1YPL084W YDR274CP87283 123 aa1.28□□□□□ -2.2
BRO1YPL084W SML1Q04964 104 aa1.28□□□□□ -2.2
BRO1YPL084W QCR7P00128 127 aa1.28□□□□□ -2.2
BRO1YPL084W RPL27AP0C2H6 136 aaKnown RBP1.28□□□□□ -2.2
BRO1YPL084W SNC2P33328 115 aa1.28□□□□□ -2.2
BRO1YPL084W HMF1P40037 129 aaKnown RBP1.28□□□□□ -2.2
BRO1YPL084W MMS2P53152 137 aa1.28□□□□□ -2.2
BRO1YPL084W MAG1P22134 296 aaKnown RBP1.27□□□□□ -2.21
BRO1YPL084W YNG1Q08465 219 aa1.27□□□□□ -2.21
BRO1YPL084W IKI3Q06706 1349 aaKnown RBP1.27□□□□□ -2.21
BRO1YPL084W YPK2P18961 677 aa1.27□□□□□ -2.21
BRO1YPL084W ATP15P21306 62 aa1.27□□□□□ -2.21
BRO1YPL084W BUD25P85052 153 aa1.27□□□□□ -2.21
BRO1YPL084W CPA1P07258 411 aaKnown RBP1.26□□□□□ -2.21
BRO1YPL084W MRS1P07266 363 aa1.26□□□□□ -2.21
BRO1YPL084W APA2P22108 325 aa1.26□□□□□ -2.21
BRO1YPL084W FZF1P32805 299 aa1.26□□□□□ -2.21
BRO1YPL084W GGA1Q06336 557 aa1.26□□□□□ -2.21
BRO1YPL084W GPM2Q12008 311 aa1.26□□□□□ -2.21
BRO1YPL084W PDR18P53756 1333 aa1.26□□□□□ -2.21
BRO1YPL084W PDR12Q02785 1511 aa1.26□□□□□ -2.21
BRO1YPL084W SIR2P06700 562 aa1.26□□□□□ -2.21
BRO1YPL084W CKS1P20486 150 aaKnown RBP1.26□□□□□ -2.21
BRO1YPL084W YBR219CP38317 127 aa1.26□□□□□ -2.21
BRO1YPL084W FLO9P39712 1322 aa1.25□□□□□ -2.21
BRO1YPL084W RPL40AP0CH08 128 aaKnown RBP1.25□□□□□ -2.21
BRO1YPL084W RPL40BP0CH09 128 aaKnown RBP1.25□□□□□ -2.21
BRO1YPL084W YBR285WP38354 144 aa1.25□□□□□ -2.21
BRO1YPL084W GAA1P39012 614 aa1.25□□□□□ -2.21
BRO1YPL084W GLE2P40066 365 aa1.25□□□□□ -2.21
BRO1YPL084W FSF1Q12029 327 aaKnown RBP1.25□□□□□ -2.21
BRO1YPL084W PDR11P40550 1411 aa1.25□□□□□ -2.21
BRO1YPL084W MLP2P40457 1679 aa1.25□□□□□ -2.21
BRO1YPL084W TY1B-HO13535 1793 aa1.25□□□□□ -2.21
BRO1YPL084W TY1B-DR5P0C2I2 1755 aa1.25□□□□□ -2.21
BRO1YPL084W TY1B-DR6P0C2I3 1755 aa1.25□□□□□ -2.21
BRO1YPL084W TY1B-LR2P0C2I5 1755 aa1.25□□□□□ -2.21
BRO1YPL084W TY1B-LR3P0C2I6 1755 aaKnown RBP1.25□□□□□ -2.21
BRO1YPL084W TY1B-PR1P0C2I9 1755 aaKnown RBP1.25□□□□□ -2.21
BRO1YPL084W TY1B-PR2P0C2J0 1756 aa1.25□□□□□ -2.21
BRO1YPL084W TY1B-PR3P0C2J1 1755 aaKnown RBP1.25□□□□□ -2.21
BRO1YPL084W TY1B-JR1P47098 1755 aa1.25□□□□□ -2.21
BRO1YPL084W TY1B-ML2Q03434 1755 aaKnown RBP1.25□□□□□ -2.21
BRO1YPL084W TY1B-ER1Q03612 1755 aa1.25□□□□□ -2.21
BRO1YPL084W TY1B-ML1Q04711 1755 aaKnown RBP1.25□□□□□ -2.21
BRO1YPL084W TY1B-GR2Q12269 1755 aa1.25□□□□□ -2.21
BRO1YPL084W TY1B-OLQ12273 1755 aa1.25□□□□□ -2.21
BRO1YPL084W TY1B-PLQ12414 1755 aaKnown RBP1.25□□□□□ -2.21
BRO1YPL084W NUM1Q00402 2748 aa1.25□□□□□ -2.21
BRO1YPL084W ASF2P32448 525 aaPredicted RBP1.25□□□□□ -2.21
BRO1YPL084W AVT2P39981 480 aa1.25□□□□□ -2.21
BRO1YPL084W HNT1Q04344 158 aaKnown RBP1.25□□□□□ -2.21
BRO1YPL084W IQG1Q12280 1495 aa1.24□□□□□ -2.21
BRO1YPL084W ERG10P41338 398 aaKnown RBP1.24□□□□□ -2.21
BRO1YPL084W IGO2Q9P305 131 aa1.24□□□□□ -2.21
BRO1YPL084W YRF1-3P0CX14 1859 aa1.24□□□□□ -2.21
BRO1YPL084W YRF1-7P0CX15 1859 aa1.24□□□□□ -2.21
BRO1YPL084W YRF1-6P53819 1859 aa1.24□□□□□ -2.21
BRO1YPL084W CNB1P25296 175 aa1.24□□□□□ -2.21
BRO1YPL084W SAY1P53324 424 aa1.24□□□□□ -2.21
BRO1YPL084W GIM3P53900 129 aa1.24□□□□□ -2.21
BRO1YPL084W GEA1P47102 1408 aaPredicted RBP1.23□□□□□ -2.21
BRO1YPL084W MBF1O14467 151 aaKnown RBP1.23□□□□□ -2.21
BRO1YPL084W FUS2Q05670 677 aa1.23□□□□□ -2.21
BRO1YPL084W CSI2Q08054 341 aa1.23□□□□□ -2.21
BRO1YPL084W ADE1P27616 306 aa1.23□□□□□ -2.21
BRO1YPL084W YBR209WP38311 105 aa1.22□□□□□ -2.21
BRO1YPL084W YAP3P38749 330 aa1.22□□□□□ -2.21
BRO1YPL084W ARP3P47117 449 aaKnown RBP1.22□□□□□ -2.21
BRO1YPL084W DGA1Q08650 418 aa1.22□□□□□ -2.21
BRO1YPL084W ATG40Q99325 256 aa1.22□□□□□ -2.21
BRO1YPL084W YLR236CA0A023PZG4 107 aa1.22□□□□□ -2.21
BRO1YPL084W YOL162WP0CF19 215 aa1.22□□□□□ -2.21
BRO1YPL084W KDX1P36005 433 aa1.22□□□□□ -2.21
BRO1YPL084W SHE2P36068 246 aaKnown RBP RIP-Chip data1.22□□□□□ -2.21 RIP-Chip
BRO1YPL084W OPY1P38271 328 aa1.22□□□□□ -2.21
BRO1YPL084W YNL184CP53876 108 aa1.22□□□□□ -2.21
BRO1YPL084W ARO80Q04052 950 aa1.22□□□□□ -2.21
BRO1YPL084W YLR162WQ06235 118 aa1.22□□□□□ -2.21
BRO1YPL084W YCR090CP25654 182 aaKnown RBP1.21□□□□□ -2.22
BRO1YPL084W OCH1P31755 480 aa1.21□□□□□ -2.22
BRO1YPL084W YKR045CP36138 183 aa1.21□□□□□ -2.22
BRO1YPL084W AIM2P39721 246 aa1.21□□□□□ -2.22
BRO1YPL084W YER135CP40082 130 aa1.21□□□□□ -2.22
BRO1YPL084W PDS1P40316 373 aaPredicted RBP1.21□□□□□ -2.22
BRO1YPL084W YOL024WQ08172 172 aa1.21□□□□□ -2.22
BRO1YPL084W RIO1Q12196 484 aaKnown RBP1.21□□□□□ -2.22
BRO1YPL084W ODC2Q99297 307 aa1.21□□□□□ -2.22
BRO1YPL084W POR1P04840 283 aaKnown RBP1.21□□□□□ -2.22
BRO1YPL084W TFC1P32367 649 aa1.21□□□□□ -2.22
BRO1YPL084W TMA19P35691 167 aaKnown RBP1.21□□□□□ -2.22
BRO1YPL084W TVP23P38962 199 aa1.21□□□□□ -2.22
BRO1YPL084W ERJ5P43613 295 aaPredicted RBP1.21□□□□□ -2.22
BRO1YPL084W KNH1P50112 268 aa1.21□□□□□ -2.22
BRO1YPL084W POP3P53833 195 aaPredicted RBP1.21□□□□□ -2.22
BRO1YPL084W ANT1Q06497 328 aa1.21□□□□□ -2.22
BRO1YPL084W NOC4Q06512 552 aaPredicted RBP1.21□□□□□ -2.22
BRO1YPL084W TOR1P35169 2470 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms