RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C MRPL20P22354 195 aaPredicted RBP2.65□□□□□ -1.99
LCB4YOR171C RPL16AP26784 199 aaKnown RBP2.65□□□□□ -1.99
LCB4YOR171C TKL2P33315 681 aa2.65□□□□□ -1.99
LCB4YOR171C YBR063CP38083 404 aa2.65□□□□□ -1.99
LCB4YOR171C MBA1P38300 278 aa2.65□□□□□ -1.99
LCB4YOR171C ERV15P38312 142 aa2.65□□□□□ -1.99
LCB4YOR171C YHR140WP38842 239 aa2.65□□□□□ -1.99
LCB4YOR171C FIS1P40515 155 aa2.65□□□□□ -1.99
LCB4YOR171C GPI2P46961 280 aa2.65□□□□□ -1.99
LCB4YOR171C TTI2P47168 421 aa2.65□□□□□ -1.99
LCB4YOR171C ERV29P53337 310 aa2.65□□□□□ -1.99
LCB4YOR171C ALG9P53868 555 aaKnown RBP2.65□□□□□ -1.99
LCB4YOR171C SYC1Q08553 188 aaPredicted RBP2.65□□□□□ -1.99
LCB4YOR171C UIP4Q08926 304 aa2.65□□□□□ -1.99
LCB4YOR171C RSF2P46974 1380 aa2.64□□□□□ -1.99
LCB4YOR171C Q0255P03881 472 aa2.64□□□□□ -1.99
LCB4YOR171C RAD10P06838 210 aa2.64□□□□□ -1.99
LCB4YOR171C UBC5P15732 148 aa2.64□□□□□ -1.99
LCB4YOR171C MAG1P22134 296 aaKnown RBP2.64□□□□□ -1.99
LCB4YOR171C SCM4P32564 187 aa2.64□□□□□ -1.99
LCB4YOR171C MTC6P38849 526 aa2.64□□□□□ -1.99
LCB4YOR171C DOC1P53068 250 aa2.64□□□□□ -1.99
LCB4YOR171C YGL088WP53151 121 aa2.64□□□□□ -1.99
LCB4YOR171C YNL010WP53981 241 aaKnown RBP2.64□□□□□ -1.99
LCB4YOR171C GRH1Q04410 372 aaKnown RBP2.64□□□□□ -1.99
LCB4YOR171C NDD1Q08887 554 aa2.64□□□□□ -1.99
LCB4YOR171C MCP1Q12106 302 aa2.64□□□□□ -1.99
LCB4YOR171C IZH2Q12442 317 aa2.64□□□□□ -1.99
LCB4YOR171C HUT1Q12520 339 aa2.64□□□□□ -1.99
LCB4YOR171C YPR014CQ6B0W2 109 aa2.64□□□□□ -1.99
LCB4YOR171C YMR316C-AI2HB70 103 aa2.63□□□□□ -1.99
LCB4YOR171C RPL15AP05748 204 aaKnown RBP2.63□□□□□ -1.99
LCB4YOR171C RPL23AP0CX41 137 aaKnown RBP2.63□□□□□ -1.99
LCB4YOR171C RPL23BP0CX42 137 aaKnown RBP2.63□□□□□ -1.99
LCB4YOR171C HYP2P23301 157 aaKnown RBP2.63□□□□□ -1.99
LCB4YOR171C GPX1P36014 167 aa2.63□□□□□ -1.99
LCB4YOR171C RCN1P36054 211 aa2.63□□□□□ -1.99
LCB4YOR171C YGR015CP53208 328 aa2.63□□□□□ -1.99
LCB4YOR171C TPC1P53257 314 aa2.63□□□□□ -1.99
LCB4YOR171C WSC2P53832 503 aa2.63□□□□□ -1.99
LCB4YOR171C SCW10Q04951 389 aa2.63□□□□□ -1.99
LCB4YOR171C YLR177WQ06251 628 aa2.63□□□□□ -1.99
LCB4YOR171C YCR024C-BQ3E7Z8 88 aa2.63□□□□□ -1.99
LCB4YOR171C HSL1P34244 1518 aa2.63□□□□□ -1.99
LCB4YOR171C SGA1P08019 549 aa2.62□□□□□ -1.99
LCB4YOR171C LDB16P25587 256 aa2.62□□□□□ -1.99
LCB4YOR171C AGA1P32323 725 aa2.62□□□□□ -1.99
LCB4YOR171C YHR130CP38834 111 aa2.62□□□□□ -1.99
LCB4YOR171C RPB11P38902 120 aa2.62□□□□□ -1.99
LCB4YOR171C GGC1P38988 300 aa2.62□□□□□ -1.99
LCB4YOR171C TIM17P39515 158 aa2.62□□□□□ -1.99
LCB4YOR171C PRM5P40476 318 aa2.62□□□□□ -1.99
LCB4YOR171C AVT7P40501 490 aa2.62□□□□□ -1.99
LCB4YOR171C GON7P46984 123 aa2.62□□□□□ -1.99
LCB4YOR171C FMP48P53233 369 aa2.62□□□□□ -1.99
LCB4YOR171C FMP41P53889 259 aaKnown RBP2.62□□□□□ -1.99
LCB4YOR171C BUD25P85052 153 aa2.62□□□□□ -1.99
LCB4YOR171C UPS1Q05776 175 aa2.62□□□□□ -1.99
LCB4YOR171C TY1B-HO13535 1793 aa2.62□□□□□ -1.99
LCB4YOR171C YSP2Q06681 1438 aa2.62□□□□□ -1.99
LCB4YOR171C HEM4P06174 275 aa2.62□□□□□ -1.99
LCB4YOR171C RPS14AP06367 137 aaKnown RBP2.62□□□□□ -1.99
LCB4YOR171C SPT15P13393 240 aaKnown RBP2.62□□□□□ -1.99
LCB4YOR171C BGL2P15703 313 aaKnown RBP2.62□□□□□ -1.99
LCB4YOR171C RPL14AP36105 138 aaKnown RBP2.62□□□□□ -1.99
LCB4YOR171C RPL14BP38754 138 aaKnown RBP2.62□□□□□ -1.99
LCB4YOR171C RPS14BP39516 138 aaKnown RBP2.62□□□□□ -1.99
LCB4YOR171C YER181CP40097 107 aa2.62□□□□□ -1.99
LCB4YOR171C RPR2P40571 144 aa2.62□□□□□ -1.99
LCB4YOR171C CAT5P41735 233 aa2.62□□□□□ -1.99
LCB4YOR171C ERV14P53173 138 aa2.62□□□□□ -1.99
LCB4YOR171C AAH1P53909 347 aa2.62□□□□□ -1.99
LCB4YOR171C MIM1Q08176 113 aa2.62□□□□□ -1.99
LCB4YOR171C YOR292CQ08743 309 aa2.62□□□□□ -1.99
LCB4YOR171C YPR063CQ12160 140 aa2.62□□□□□ -1.99
LCB4YOR171C LYS2P07702 1392 aa2.62□□□□□ -1.99
LCB4YOR171C MRPL44P19956 98 aa2.61□□□□□ -1.99
LCB4YOR171C ARO2P28777 376 aaKnown RBP2.61□□□□□ -1.99
LCB4YOR171C AVT2P39981 480 aa2.61□□□□□ -1.99
LCB4YOR171C YPL245WQ12179 454 aaKnown RBP2.61□□□□□ -1.99
LCB4YOR171C TIR4Q12218 487 aaPredicted RBP2.61□□□□□ -1.99
LCB4YOR171C PCL9Q12477 304 aa2.61□□□□□ -1.99
LCB4YOR171C ISD11Q6Q560 94 aa2.61□□□□□ -1.99
LCB4YOR171C ATP5P09457 212 aa2.6□□□□□ -1.99
LCB4YOR171C YRA2P36036 203 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
LCB4YOR171C SDH4P37298 181 aa2.6□□□□□ -1.99
LCB4YOR171C GAA1P39012 614 aa2.6□□□□□ -1.99
LCB4YOR171C PTI1P39927 425 aaPredicted RBP2.6□□□□□ -1.99
LCB4YOR171C YJL218WP40892 196 aaKnown RBP2.6□□□□□ -1.99
LCB4YOR171C YJL213WP40896 331 aa2.6□□□□□ -1.99
LCB4YOR171C GNA1P43577 159 aaPredicted RBP2.6□□□□□ -1.99
LCB4YOR171C SAY1P53324 424 aa2.6□□□□□ -1.99
LCB4YOR171C GAS3Q03655 524 aa2.6□□□□□ -1.99
LCB4YOR171C ATG10Q07879 167 aa2.6□□□□□ -1.99
LCB4YOR171C AYT1Q12226 474 aa2.6□□□□□ -1.99
LCB4YOR171C TDA8Q6B2U8 126 aa2.6□□□□□ -1.99
LCB4YOR171C YFR032C-BQ8TGU2 87 aa2.6□□□□□ -1.99
LCB4YOR171C HTL1Q9URQ5 78 aa2.6□□□□□ -1.99
LCB4YOR171C LTE1P07866 1435 aa2.6□□□□□ -1.99
LCB4YOR171C PIS1P06197 220 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 74.5 ms