RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W RMD6P39975 231 aa5.74□□□□□ -1.49
HDA1YNL021W YER076CP40049 302 aa5.74□□□□□ -1.49
HDA1YNL021W ATG18P43601 500 aa5.74□□□□□ -1.49
HDA1YNL021W RBL2P48606 106 aaKnown RBP5.74□□□□□ -1.49
HDA1YNL021W RUB1Q03919 77 aa5.74□□□□□ -1.49
HDA1YNL021W CUP2P15315 225 aa5.73□□□□□ -1.49
HDA1YNL021W MCK1P21965 375 aaKnown RBP5.73□□□□□ -1.49
HDA1YNL021W YBR242WP38331 238 aa5.73□□□□□ -1.49
HDA1YNL021W AIM2P39721 246 aa5.73□□□□□ -1.49
HDA1YNL021W PRM8P53174 237 aa5.73□□□□□ -1.49
HDA1YNL021W YLR031WQ07978 186 aa5.73□□□□□ -1.49
HDA1YNL021W YOR186WQ08560 144 aa5.73□□□□□ -1.49
HDA1YNL021W YOR283WQ12040 230 aaKnown RBP5.73□□□□□ -1.49
HDA1YNL021W MRS1P07266 363 aa5.72□□□□□ -1.49
HDA1YNL021W IDP1P21954 428 aaKnown RBP5.72□□□□□ -1.49
HDA1YNL021W FMP46P36141 133 aaKnown RBP5.72□□□□□ -1.49
HDA1YNL021W YIL067CP40514 678 aa5.72□□□□□ -1.49
HDA1YNL021W DML1Q03652 475 aa5.72□□□□□ -1.49
HDA1YNL021W TRM10Q12400 293 aa5.72□□□□□ -1.49
HDA1YNL021W IPT1P38954 527 aa5.72□□□□□ -1.49
HDA1YNL021W PEX17P40155 199 aa5.72□□□□□ -1.49
HDA1YNL021W SNM1P40993 198 aa5.72□□□□□ -1.49
HDA1YNL021W BXI1P48558 297 aa5.72□□□□□ -1.49
HDA1YNL021W FMP42Q04991 504 aa5.72□□□□□ -1.49
HDA1YNL021W GCN3P14741 305 aa5.71□□□□□ -1.5
HDA1YNL021W RPB5P20434 215 aa5.71□□□□□ -1.5
HDA1YNL021W PST2Q12335 198 aaKnown RBP5.71□□□□□ -1.5
HDA1YNL021W PET9P18239 318 aaKnown RBP5.71□□□□□ -1.5
HDA1YNL021W SHE1P38200 338 aa5.71□□□□□ -1.5
HDA1YNL021W MRH4P53166 561 aa5.71□□□□□ -1.5
HDA1YNL021W CRH1P53301 507 aa5.71□□□□□ -1.5
HDA1YNL021W ARL3Q02804 198 aa5.71□□□□□ -1.5
HDA1YNL021W YAL063C-AQ3E791 96 aa5.71□□□□□ -1.5
HDA1YNL021W BEM2P39960 2167 aaKnown RBP5.7□□□□□ -1.5
HDA1YNL021W SEC4P07560 215 aaKnown RBP5.7□□□□□ -1.5
HDA1YNL021W YCR043CP25361 127 aa5.7□□□□□ -1.5
HDA1YNL021W LDS1P31379 325 aa5.7□□□□□ -1.5
HDA1YNL021W ARO7P32178 256 aa5.7□□□□□ -1.5
HDA1YNL021W GSP1P32835 219 aaKnown RBP5.7□□□□□ -1.5
HDA1YNL021W GSP2P32836 220 aaKnown RBP5.7□□□□□ -1.5
HDA1YNL021W SUI1P32911 108 aaKnown RBP5.7□□□□□ -1.5
HDA1YNL021W AST2P39945 430 aaKnown RBP5.7□□□□□ -1.5
HDA1YNL021W RDI1Q12434 202 aa5.7□□□□□ -1.5
HDA1YNL021W TAH1P25638 111 aaPredicted RBP5.69□□□□□ -1.5
HDA1YNL021W FCY21P40039 528 aa5.69□□□□□ -1.5
HDA1YNL021W YMR144WP40214 342 aaKnown RBP5.69□□□□□ -1.5
HDA1YNL021W RNH202Q05635 350 aa5.69□□□□□ -1.5
HDA1YNL021W FRQ1Q06389 190 aa5.69□□□□□ -1.5
HDA1YNL021W YPL278CQ08990 100 aa5.69□□□□□ -1.5
HDA1YNL021W FYV7Q12247 151 aa5.69□□□□□ -1.5
HDA1YNL021W YER078W-AQ3E7A2 54 aa5.69□□□□□ -1.5
HDA1YNL021W YCL001W-BQ96VH2 84 aa5.69□□□□□ -1.5
HDA1YNL021W HHF1P02309 103 aaKnown RBP5.69□□□□□ -1.5
HDA1YNL021W POP8P38208 133 aa5.69□□□□□ -1.5
HDA1YNL021W CIS3P47001 227 aa5.69□□□□□ -1.5
HDA1YNL021W GAL83Q04739 417 aa5.69□□□□□ -1.5
HDA1YNL021W FDH1Q08911 376 aa5.69□□□□□ -1.5
HDA1YNL021W YLR050CQ12155 161 aaKnown RBP5.69□□□□□ -1.5
HDA1YNL021W PRS3P38689 320 aaKnown RBP5.68□□□□□ -1.5
HDA1YNL021W RPS12P48589 143 aaKnown RBP5.68□□□□□ -1.5
HDA1YNL021W UBC12P52491 188 aa5.68□□□□□ -1.5
HDA1YNL021W AIM34Q03673 198 aa5.68□□□□□ -1.5
HDA1YNL021W ECM14P38836 430 aa5.68□□□□□ -1.5
HDA1YNL021W LIP2Q06005 328 aa5.68□□□□□ -1.5
HDA1YNL021W IES3Q12345 250 aa5.68□□□□□ -1.5
HDA1YNL021W RTR2Q12378 196 aa5.68□□□□□ -1.5
HDA1YNL021W YMR316C-AI2HB70 103 aa5.67□□□□□ -1.5
HDA1YNL021W YOR304C-AO14468 76 aa5.67□□□□□ -1.5
HDA1YNL021W FMP23P38231 175 aa5.67□□□□□ -1.5
HDA1YNL021W RRG9P40156 214 aa5.67□□□□□ -1.5
HDA1YNL021W AAH1P53909 347 aa5.67□□□□□ -1.5
HDA1YNL021W GRX5Q02784 150 aa5.67□□□□□ -1.5
HDA1YNL021W YOL024WQ08172 172 aa5.67□□□□□ -1.5
HDA1YNL021W YPR117WQ06116 2489 aa5.67□□□□□ -1.5
HDA1YNL021W ARN2P38724 620 aa5.66□□□□□ -1.5
HDA1YNL021W MPC1P53157 130 aaKnown RBP5.66□□□□□ -1.5
HDA1YNL021W CWC27Q02770 301 aa5.66□□□□□ -1.5
HDA1YNL021W YCL021W-AQ96VH3 125 aa5.66□□□□□ -1.5
HDA1YNL021W SEC22P22214 214 aa5.66□□□□□ -1.5
HDA1YNL021W YBL010CP32788 280 aa5.65□□□□□ -1.5
HDA1YNL021W YNL208WP40159 199 aaKnown RBP5.65□□□□□ -1.5
HDA1YNL021W YFL067WP43537 175 aa5.65□□□□□ -1.5
HDA1YNL021W YOR062CP36025 268 aa5.65□□□□□ -1.51
HDA1YNL021W YLR030WQ07967 263 aa5.65□□□□□ -1.51
HDA1YNL021W SYC1Q08553 188 aaPredicted RBP5.65□□□□□ -1.51
HDA1YNL021W MRPL39P36533 70 aa5.64□□□□□ -1.51
HDA1YNL021W MPA43P53583 542 aaPredicted RBP5.64□□□□□ -1.51
HDA1YNL021W GPI17Q04080 534 aa5.64□□□□□ -1.51
HDA1YNL021W YOR214CQ12282 236 aa5.64□□□□□ -1.51
HDA1YNL021W IGO2Q9P305 131 aa5.64□□□□□ -1.51
HDA1YNL021W SUA7P29055 345 aaPredicted RBP5.63□□□□□ -1.51
HDA1YNL021W TRR2P38816 342 aa5.63□□□□□ -1.51
HDA1YNL021W BAT2P47176 376 aaKnown RBP5.63□□□□□ -1.51
HDA1YNL021W YNL184CP53876 108 aa5.63□□□□□ -1.51
HDA1YNL021W ERV2Q12284 196 aa5.63□□□□□ -1.51
HDA1YNL021W IZH2Q12442 317 aa5.63□□□□□ -1.51
HDA1YNL021W APS1P35181 156 aa5.63□□□□□ -1.51
HDA1YNL021W XBP1P40489 647 aa5.63□□□□□ -1.51
HDA1YNL021W AIM25P47140 327 aa5.63□□□□□ -1.51
HDA1YNL021W YGR018CP53211 109 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms