RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUB1	YNL016W	YCR099C	P25657	155 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	DOG2	P38773	246 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	GLE2	P40066	365 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	YER137C	P40083	148 aa	Known RBP	3.2	□□□□□ -1.9
PUB1	YNL016W	YIL152W	P40455	235 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	XBP1	P40489	647 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	CUP9	P41817	306 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	ATG18	P43601	500 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	COS10	P52924	374 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	YGR018C	P53211	109 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	YGR050C	P53231	118 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	YLR281C	Q05863	155 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	HRI1	Q05905	244 aa	Known RBP	3.2	□□□□□ -1.9
PUB1	YNL016W	SLD7	Q08457	257 aa		3.2	□□□□□ -1.9
PUB1	YNL016W	RPL25	P04456	142 aa	Known RBP	3.19	□□□□□ -1.9
PUB1	YNL016W	SIR2	P06700	562 aa		3.19	□□□□□ -1.9
PUB1	YNL016W	FCY2	P17064	533 aa		3.19	□□□□□ -1.9
PUB1	YNL016W	SCO1	P23833	295 aa		3.19	□□□□□ -1.9
PUB1	YNL016W	CNB1	P25296	175 aa		3.19	□□□□□ -1.9
PUB1	YNL016W	CDC50	P25656	391 aa		3.19	□□□□□ -1.9
PUB1	YNL016W	ERG24	P32462	438 aa	Known RBP	3.19	□□□□□ -1.9
PUB1	YNL016W	RPS27A	P35997	82 aa	Known RBP	3.19	□□□□□ -1.9
PUB1	YNL016W	RPS27B	P38711	82 aa		3.19	□□□□□ -1.9
PUB1	YNL016W	EFM1	P38732	585 aa		3.19	□□□□□ -1.9
PUB1	YNL016W	YHI9	P38765	294 aa		3.19	□□□□□ -1.9
PUB1	YNL016W	EDC2	P40023	145 aa	Predicted RBP	3.19	□□□□□ -1.9
PUB1	YNL016W	YNL208W	P40159	199 aa	Known RBP	3.19	□□□□□ -1.9
PUB1	YNL016W	ILM1	P47155	203 aa		3.19	□□□□□ -1.9
PUB1	YNL016W	YNL010W	P53981	241 aa	Known RBP	3.19	□□□□□ -1.9
PUB1	YNL016W	MRX11	Q03079	207 aa		3.19	□□□□□ -1.9
PUB1	YNL016W	YLR462W	O13556	202 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	NSP1	P14907	823 aa	Known RBP	3.18	□□□□□ -1.9
PUB1	YNL016W	MRPS28	P21771	286 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	MAG1	P22134	296 aa	Known RBP	3.18	□□□□□ -1.9
PUB1	YNL016W	IMP1	P28627	190 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	FMP23	P38231	175 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	TRR2	P38816	342 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	WSC2	P53832	503 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	YML108W	Q03759	105 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	GPI17	Q04080	534 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	YMR317W	Q04893	1140 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	SHH4	Q06236	168 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	YOL160W	Q08321	113 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	JID1	Q12350	301 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	PST1	Q12355	444 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	YAL063C-A	Q3E791	96 aa		3.18	□□□□□ -1.9
PUB1	YNL016W	CDC8	P00572	216 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	CDC7	P06243	507 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	RPS8A	P0CX39	200 aa	Known RBP	3.17	□□□□□ -1.9
PUB1	YNL016W	RPS8B	P0CX40	200 aa	Known RBP	3.17	□□□□□ -1.9
PUB1	YNL016W	BGL2	P15703	313 aa	Known RBP	3.17	□□□□□ -1.9
PUB1	YNL016W	CPR4	P25334	318 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	SUA7	P29055	345 aa	Predicted RBP	3.17	□□□□□ -1.9
PUB1	YNL016W	PTM1	P32857	523 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	CPR5	P35176	225 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	PRS3	P38689	320 aa	Known RBP	3.17	□□□□□ -1.9
PUB1	YNL016W	RMD6	P39975	231 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	CAT5	P41735	233 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	YFL067W	P43537	175 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	APS3	P47064	194 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	CRH1	P53301	507 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	RNH201	P53942	307 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	RAV2	Q03956	351 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	RRG7	Q08774	242 aa	Predicted RBP	3.17	□□□□□ -1.9
PUB1	YNL016W	YOR376W	Q08900	122 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	YPR202W	Q08993	238 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	DAS2	Q12084	232 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	YBL008W-A	Q3E821	79 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	YHR214C-E	Q8TGK0	99 aa		3.17	□□□□□ -1.9
PUB1	YNL016W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
PUB1	YNL016W	ATG22	P25568	528 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	ERG2	P32352	222 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	RPS1A	P33442	255 aa	Known RBP	3.16	□□□□□ -1.9
PUB1	YNL016W	YKL102C	P34249	101 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	SFK1	P35735	353 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	OM14	P38325	134 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	YHL044W	P38727	235 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	RRG9	P40156	214 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	YIL012W	P40551	113 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	YFL012W	P43580	148 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	UBC7	Q02159	165 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	RMI1	Q02685	241 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	YDR476C	Q03362	224 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	YMR320W	Q04897	101 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	Q0144	Q9ZZW2	109 aa		3.16	□□□□□ -1.9
PUB1	YNL016W	DYN1	P36022	4092 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	MBF1	O14467	151 aa	Known RBP	3.15	□□□□□ -1.9
PUB1	YNL016W	UBI4	P0CG63	381 aa	Known RBP	3.15	□□□□□ -1.9
PUB1	YNL016W	PBI2	P0CT04	75 aa	Known RBP	3.15	□□□□□ -1.9
PUB1	YNL016W	SDH3	P33421	198 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	YBR285W	P38354	144 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	PHO89	P38361	574 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	YGP1	P38616	354 aa	Known RBP	3.15	□□□□□ -1.9
PUB1	YNL016W	GGC1	P38988	300 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	YND1	P40009	630 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	AVT6	P40074	448 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	ARO8	P53090	500 aa	Known RBP	3.15	□□□□□ -1.9
PUB1	YNL016W	PGA1	P53896	198 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	YDR249C	Q03787	373 aa		3.15	□□□□□ -1.9
PUB1	YNL016W	FMP42	Q04991	504 aa		3.15	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms