RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP116	YMR047C	TFS1	P14306	219 aa		4.21	□□□□□ -1.74
NUP116	YMR047C	DOG2	P38773	246 aa		4.21	□□□□□ -1.74
NUP116	YMR047C	ATG18	P43601	500 aa		4.21	□□□□□ -1.74
NUP116	YMR047C	MIC26	P50087	233 aa		4.21	□□□□□ -1.74
NUP116	YMR047C	MIX14	Q04341	121 aa		4.21	□□□□□ -1.74
NUP116	YMR047C	YDL180W	Q12301	547 aa		4.21	□□□□□ -1.74
NUP116	YMR047C	GEP5	Q12393	293 aa		4.21	□□□□□ -1.74
NUP116	YMR047C	YOR343C	Q12484	108 aa		4.21	□□□□□ -1.74
NUP116	YMR047C	ERV1	P27882	189 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	MSK1	P32048	576 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	MIC12	P38341	106 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	IPT1	P38954	527 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	UBC11	P52492	156 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	BUD9	P53226	547 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	HRT1	Q08273	121 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	YOL114C	Q12322	202 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	MRPL6	P32904	214 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	RPP1	P38786	293 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	BAT2	P47176	376 aa	Known RBP	4.2	□□□□□ -1.74
NUP116	YMR047C	MTM1	P53320	366 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	YNL165W	P53891	406 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	LSM7	P53905	115 aa	Known RBP	4.2	□□□□□ -1.74
NUP116	YMR047C	RRG8	Q06109	277 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	PRS5	Q12265	496 aa	Known RBP	4.2	□□□□□ -1.74
NUP116	YMR047C	YJR112W-A	Q3E743	109 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	YKL183C-A	Q3E765	70 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	CYC3	P06182	269 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	TIM12	P32830	109 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	NTF2	P33331	125 aa	Known RBP	4.2	□□□□□ -1.74
NUP116	YMR047C	SLZ1	P40167	298 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	FLX1	P40464	311 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	TOS2	P50078	622 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	YMR320W	Q04897	101 aa		4.2	□□□□□ -1.74
NUP116	YMR047C	YLR415C	O13578	112 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	YER039C-A	P0CD97	72 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	PDA1	P16387	420 aa	Known RBP	4.19	□□□□□ -1.74
NUP116	YMR047C	YCL042W	P25572	119 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	MRP17	P28778	131 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	MRP49	P32388	137 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	YKR041W	P36134	250 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	YEA6	P39953	335 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	YER076C	P40049	302 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	BUL1	P48524	976 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	YML018C	Q03730	393 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	RAF1	Q06891	181 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	YCT1	Q12235	531 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	PRE9	P23638	258 aa	Known RBP	4.19	□□□□□ -1.74
NUP116	YMR047C	OCH1	P31755	480 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	RTC2	P38279	296 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	SAS2	P40963	338 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	THG1	P53215	237 aa	Known RBP	4.19	□□□□□ -1.74
NUP116	YMR047C	ISD11	Q6Q560	94 aa		4.19	□□□□□ -1.74
NUP116	YMR047C	TIR1	P10863	254 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	NHP6B	P11633	99 aa	Known RBP	4.18	□□□□□ -1.74
NUP116	YMR047C	INO4	P13902	151 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	FMT1	P32785	401 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	SRP14	P38985	146 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	GPI15	P53961	229 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	MRPS16	Q02608	121 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	PRP11	Q07350	266 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP116	YMR047C	ISU2	Q12056	156 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	SUS1	Q6WNK7	96 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	PRP8	P33334	2413 aa	Known RBP	4.18	□□□□□ -1.74
NUP116	YMR047C	PPA2	P28239	310 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	PPZ2	P33329	710 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	ISC1	P40015	477 aa	Known RBP	4.18	□□□□□ -1.74
NUP116	YMR047C	BMT5	P40493	336 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	YJL118W	P47022	219 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	YGR168C	P53293	376 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	MSO1	P53604	210 aa	Known RBP	4.18	□□□□□ -1.74
NUP116	YMR047C	SPR6	Q01684	191 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	SCW10	Q04951	389 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	CYC1	P00044	109 aa	Predicted RBP	4.18	□□□□□ -1.74
NUP116	YMR047C	BGL2	P15703	313 aa	Known RBP	4.18	□□□□□ -1.74
NUP116	YMR047C	FCY2	P17064	533 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	CPR2	P23285	205 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	YIL165C	P40446	119 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	CAT5	P41735	233 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	UBC7	Q02159	165 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	BTS1	Q12051	335 aa		4.18	□□□□□ -1.74
NUP116	YMR047C	YLR050C	Q12155	161 aa	Known RBP	4.18	□□□□□ -1.74
NUP116	YMR047C	YER145C-A	A0A023PYF4	145 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	SPO73	P40031	143 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	APJ1	P53940	528 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	RPL13A	Q12690	199 aa	Predicted RBP	4.17	□□□□□ -1.74
NUP116	YMR047C	TRA1	P38811	3744 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	MDH2	P22133	377 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	MRPS5	P33759	307 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	VBA2	P38358	474 aa	Known RBP	4.17	□□□□□ -1.74
NUP116	YMR047C	DOG1	P38774	246 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	YHR180W	P38868	163 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	YNR048W	P53740	393 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	RSM23	Q01163	450 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	Q0297	Q9ZZV8	51 aa		4.17	□□□□□ -1.74
NUP116	YMR047C	YBR121C-A	P0C5L4	52 aa		4.16	□□□□□ -1.74
NUP116	YMR047C	CTA1	P15202	515 aa		4.16	□□□□□ -1.74
NUP116	YMR047C	YNL194C	P40169	301 aa		4.16	□□□□□ -1.74
NUP116	YMR047C	YGR149W	P48236	432 aa		4.16	□□□□□ -1.74
NUP116	YMR047C	YIP5	P53108	310 aa		4.16	□□□□□ -1.74
NUP116	YMR047C	COX18	P53239	316 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms