RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C RPL7BQ12213 244 aaKnown RBP3.8□□□□□ -1.8
CDC42YLR229C FRE7Q12333 620 aa3.8□□□□□ -1.8
CDC42YLR229C YIL046W-AQ3E7Z4 54 aa3.8□□□□□ -1.8
CDC42YLR229C YAL064W-BO13512 126 aa3.79□□□□□ -1.8
CDC42YLR229C TDH3P00359 332 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
CDC42YLR229C SCEIP03882 235 aa3.79□□□□□ -1.8
CDC42YLR229C ILV5P06168 395 aaKnown RBP3.79□□□□□ -1.8
CDC42YLR229C RIP1P08067 215 aa3.79□□□□□ -1.8
CDC42YLR229C URA5P13298 226 aaKnown RBP3.79□□□□□ -1.8
CDC42YLR229C MIR1P23641 311 aaKnown RBP3.79□□□□□ -1.8
CDC42YLR229C MEK1P24719 497 aaPredicted RBP3.79□□□□□ -1.8
CDC42YLR229C RNA15P25299 296 aaPredicted RBP3.79□□□□□ -1.8
CDC42YLR229C DEG1P31115 442 aaKnown RBP3.79□□□□□ -1.8
CDC42YLR229C FRM2P37261 193 aa3.79□□□□□ -1.8
CDC42YLR229C MIX23P38162 196 aa3.79□□□□□ -1.8
CDC42YLR229C YBR096WP38256 230 aa3.79□□□□□ -1.8
CDC42YLR229C RTC3P38804 111 aaPredicted RBP3.79□□□□□ -1.8
CDC42YLR229C YER010CP40011 234 aa3.79□□□□□ -1.8
CDC42YLR229C YGR126WP53274 230 aa3.79□□□□□ -1.8
CDC42YLR229C HHT1P61830 136 aa3.79□□□□□ -1.8
CDC42YLR229C PET191Q02772 108 aa3.79□□□□□ -1.8
CDC42YLR229C DIG2Q03373 323 aaKnown RBP3.79□□□□□ -1.8
CDC42YLR229C CGI121Q03705 181 aaKnown RBP3.79□□□□□ -1.8
CDC42YLR229C YMR082CQ04276 118 aa3.79□□□□□ -1.8
CDC42YLR229C FSH2Q05015 223 aa3.79□□□□□ -1.8
CDC42YLR229C FRQ1Q06389 190 aa3.79□□□□□ -1.8
CDC42YLR229C RDL2Q08742 149 aaKnown RBP3.79□□□□□ -1.8
CDC42YLR229C YPL272CQ08984 517 aa3.79□□□□□ -1.8
CDC42YLR229C ERP4Q12450 207 aa3.79□□□□□ -1.8
CDC42YLR229C YBR255C-AQ3E776 120 aa3.79□□□□□ -1.8
CDC42YLR229C YPR014CQ6B0W2 109 aa3.79□□□□□ -1.8
CDC42YLR229C YPT1P01123 206 aaKnown RBP3.78□□□□□ -1.8
CDC42YLR229C BGL2P15703 313 aaKnown RBP3.78□□□□□ -1.8
CDC42YLR229C DAL82P21705 255 aa3.78□□□□□ -1.8
CDC42YLR229C MDH2P22133 377 aa3.78□□□□□ -1.8
CDC42YLR229C AME1P38313 324 aa3.78□□□□□ -1.8
CDC42YLR229C YFL015CP43578 164 aa3.78□□□□□ -1.8
CDC42YLR229C ATG27P46989 271 aa3.78□□□□□ -1.8
CDC42YLR229C GWT1P47026 490 aa3.78□□□□□ -1.8
CDC42YLR229C PGU1P47180 361 aa3.78□□□□□ -1.8
CDC42YLR229C RIB4P50861 169 aaPredicted RBP3.78□□□□□ -1.8
CDC42YLR229C YPL039WQ03080 316 aa3.78□□□□□ -1.8
CDC42YLR229C YDR286CQ05530 114 aa3.78□□□□□ -1.8
CDC42YLR229C COQ11Q05892 277 aa3.78□□□□□ -1.8
CDC42YLR229C CTS2Q06350 511 aa3.78□□□□□ -1.8
CDC42YLR229C YDL242WQ07746 117 aa3.78□□□□□ -1.8
CDC42YLR229C MCH4Q08268 501 aa3.78□□□□□ -1.8
CDC42YLR229C YOR376WQ08900 122 aa3.78□□□□□ -1.8
CDC42YLR229C NIP7Q08962 181 aaKnown RBP3.78□□□□□ -1.8
CDC42YLR229C AKR2Q12013 749 aa3.78□□□□□ -1.8
CDC42YLR229C COX17Q12287 69 aa3.78□□□□□ -1.8
CDC42YLR229C ATG5Q12380 294 aa3.78□□□□□ -1.8
CDC42YLR229C RAX2Q12465 1220 aa3.78□□□□□ -1.8
CDC42YLR229C CYR1P08678 2026 aaKnown RBP3.77□□□□□ -1.81
CDC42YLR229C YPR117WQ06116 2489 aa3.77□□□□□ -1.81
CDC42YLR229C YLR302CO13544 120 aa3.77□□□□□ -1.81
CDC42YLR229C COX5BP00425 151 aa3.77□□□□□ -1.81
CDC42YLR229C YHR214C-DP0CX93 97 aa3.77□□□□□ -1.81
CDC42YLR229C SPO7P18410 259 aa3.77□□□□□ -1.81
CDC42YLR229C QCR9P22289 66 aa3.77□□□□□ -1.81
CDC42YLR229C ERG8P24521 451 aa3.77□□□□□ -1.81
CDC42YLR229C ARO4P32449 370 aaKnown RBP3.77□□□□□ -1.81
CDC42YLR229C UPS2P35200 230 aa3.77□□□□□ -1.81
CDC42YLR229C PMU1P36069 295 aa3.77□□□□□ -1.81
CDC42YLR229C SHB17P36136 271 aaKnown RBP3.77□□□□□ -1.81
CDC42YLR229C YPT10P38146 199 aa3.77□□□□□ -1.81
CDC42YLR229C ARC40P38328 384 aaKnown RBP3.77□□□□□ -1.81
CDC42YLR229C SHO1P40073 367 aa3.77□□□□□ -1.81
CDC42YLR229C AGE2P40529 298 aa3.77□□□□□ -1.81
CDC42YLR229C REE1P40893 198 aa3.77□□□□□ -1.81
CDC42YLR229C YJR012CP47087 207 aa3.77□□□□□ -1.81
CDC42YLR229C XPT1P47165 209 aa3.77□□□□□ -1.81
CDC42YLR229C YGR149WP48236 432 aa3.77□□□□□ -1.81
CDC42YLR229C YGR066CP53242 292 aa3.77□□□□□ -1.81
CDC42YLR229C MSO1P53604 210 aaKnown RBP3.77□□□□□ -1.81
CDC42YLR229C RNH201P53942 307 aa3.77□□□□□ -1.81
CDC42YLR229C DAD3P69850 94 aa3.77□□□□□ -1.81
CDC42YLR229C YDR366CP87287 132 aa3.77□□□□□ -1.81
CDC42YLR229C RUB1Q03919 77 aa3.77□□□□□ -1.81
CDC42YLR229C CNL1Q06333 122 aa3.77□□□□□ -1.81
CDC42YLR229C PRP11Q07350 266 aaPredicted RBP3.77□□□□□ -1.81
CDC42YLR229C MCH1Q07376 486 aa3.77□□□□□ -1.81
CDC42YLR229C PAM18Q07914 168 aa3.77□□□□□ -1.81
CDC42YLR229C PAU23Q07987 124 aa3.77□□□□□ -1.81
CDC42YLR229C PAU17Q12370 124 aa3.77□□□□□ -1.81
CDC42YLR229C ISA2Q12425 185 aa3.77□□□□□ -1.81
CDC42YLR229C YHR214C-EQ8TGK0 99 aa3.77□□□□□ -1.81
CDC42YLR229C YOR032W-AQ8TGS1 66 aa3.77□□□□□ -1.81
CDC42YLR229C POL2P21951 2222 aaKnown RBP3.76□□□□□ -1.81
CDC42YLR229C FMP49A0A023PZB3 126 aa3.76□□□□□ -1.81
CDC42YLR229C HTB1P02293 131 aaKnown RBP3.76□□□□□ -1.81
CDC42YLR229C HTB2P02294 131 aa3.76□□□□□ -1.81
CDC42YLR229C RPS25BP0C0T4 108 aaKnown RBP3.76□□□□□ -1.81
CDC42YLR229C RPS22AP0C0W1 130 aaKnown RBP3.76□□□□□ -1.81
CDC42YLR229C PRE1P22141 198 aaKnown RBP3.76□□□□□ -1.81
CDC42YLR229C YCR007CP25354 239 aa3.76□□□□□ -1.81
CDC42YLR229C ERV1P27882 189 aa3.76□□□□□ -1.81
CDC42YLR229C YMR262WP38430 313 aa3.76□□□□□ -1.81
CDC42YLR229C DOG1P38774 246 aa3.76□□□□□ -1.81
CDC42YLR229C RPN14P53196 417 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms