RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W ARP3P47117 449 aaKnown RBP2.04□□□□□ -2.08
MSA2YKR077W YAE1P47118 141 aaPredicted RBP2.04□□□□□ -2.08
MSA2YKR077W ARO8P53090 500 aaKnown RBP2.04□□□□□ -2.08
MSA2YKR077W YER134CP40081 178 aa2.03□□□□□ -2.08
MSA2YKR077W JIP3O13555 125 aa2.02□□□□□ -2.09
MSA2YKR077W MDM35O60200 86 aa2.02□□□□□ -2.09
MSA2YKR077W YPK2P18961 677 aa2.02□□□□□ -2.09
MSA2YKR077W YAR023CD6VPM8 179 aa2.01□□□□□ -2.09
MSA2YKR077W EDC3P39998 551 aaKnown RBP2.01□□□□□ -2.09
MSA2YKR077W YNL247WP53852 767 aaKnown RBP2.01□□□□□ -2.09
MSA2YKR077W YMR099CQ03161 297 aaKnown RBP2.01□□□□□ -2.09
MSA2YKR077W YNL184CP53876 108 aa2□□□□□ -2.09
MSA2YKR077W CWC27Q02770 301 aa2□□□□□ -2.09
MSA2YKR077W YMR295CQ03559 197 aa2□□□□□ -2.09
MSA2YKR077W YLR031WQ07978 186 aa2□□□□□ -2.09
MSA2YKR077W YOL014WQ08110 124 aa2□□□□□ -2.09
MSA2YKR077W IRC23Q08416 157 aa2□□□□□ -2.09
MSA2YKR077W IGO2Q9P305 131 aa2□□□□□ -2.09
MSA2YKR077W AQY2P0CD90 149 aa1.98□□□□□ -2.09
MSA2YKR077W MTW1P39731 289 aa1.98□□□□□ -2.09
MSA2YKR077W YJR111CP47148 283 aaKnown RBP1.98□□□□□ -2.09
MSA2YKR077W YLR036CQ07986 203 aa1.98□□□□□ -2.09
MSA2YKR077W YHL042WP38729 150 aa1.97□□□□□ -2.09
MSA2YKR077W HYR1P40581 163 aaKnown RBP1.97□□□□□ -2.09
MSA2YKR077W UBC12P52491 188 aa1.97□□□□□ -2.09
MSA2YKR077W ARO80Q04052 950 aa1.97□□□□□ -2.09
MSA2YKR077W PRP11Q07350 266 aaPredicted RBP1.97□□□□□ -2.09
MSA2YKR077W YML100W-AQ8TGT0 57 aa1.97□□□□□ -2.09
MSA2YKR077W SNF4P12904 322 aa1.96□□□□□ -2.1
MSA2YKR077W PHO85P17157 305 aa1.96□□□□□ -2.1
MSA2YKR077W YHL018WP38744 120 aaPredicted RBP1.96□□□□□ -2.1
MSA2YKR077W YEL067CP39978 195 aa1.96□□□□□ -2.1
MSA2YKR077W PDS1P40316 373 aaPredicted RBP1.96□□□□□ -2.1
MSA2YKR077W RTC4P53850 401 aa1.96□□□□□ -2.1
MSA2YKR077W DAD4P69851 72 aa1.96□□□□□ -2.1
MSA2YKR077W YFL065CP43539 102 aa1.95□□□□□ -2.1
MSA2YKR077W SHH3Q04487 196 aa1.95□□□□□ -2.1
MSA2YKR077W RAD9P14737 1309 aa1.94□□□□□ -2.1
MSA2YKR077W SOK1P40317 901 aa1.94□□□□□ -2.1
MSA2YKR077W YFH7P43591 353 aa1.94□□□□□ -2.1
MSA2YKR077W TDA4P47153 279 aa1.94□□□□□ -2.1
MSA2YKR077W YMR315WQ04869 349 aaKnown RBP1.94□□□□□ -2.1
MSA2YKR077W RNH202Q05635 350 aa1.94□□□□□ -2.1
MSA2YKR077W NAT3Q06504 195 aa1.94□□□□□ -2.1
MSA2YKR077W MGT1P26188 188 aa1.93□□□□□ -2.1
MSA2YKR077W FMP23P38231 175 aa1.93□□□□□ -2.1
MSA2YKR077W YMR252CQ04814 134 aa1.93□□□□□ -2.1
MSA2YKR077W YOL024WQ08172 172 aa1.93□□□□□ -2.1
MSA2YKR077W YPR013CQ12145 317 aa1.93□□□□□ -2.1
MSA2YKR077W COX8P04039 78 aa1.92□□□□□ -2.1
MSA2YKR077W TIR1P10863 254 aa1.92□□□□□ -2.1
MSA2YKR077W PAM17P36147 197 aa1.92□□□□□ -2.1
MSA2YKR077W HPA3P39979 161 aa1.92□□□□□ -2.1
MSA2YKR077W CUP9P41817 306 aa1.92□□□□□ -2.1
MSA2YKR077W TMA22P47089 198 aaPredicted RBP1.92□□□□□ -2.1
MSA2YKR077W TLG1Q03322 224 aa1.91□□□□□ -2.1
MSA2YKR077W FIT2Q08906 153 aa1.91□□□□□ -2.1
MSA2YKR077W YHR212W-AP0CX91 67 aa1.9□□□□□ -2.11
MSA2YKR077W THG1P53215 237 aaKnown RBP1.9□□□□□ -2.11
MSA2YKR077W YNL033WP53964 284 aa1.9□□□□□ -2.11
MSA2YKR077W YMR253CQ04835 414 aa1.9□□□□□ -2.11
MSA2YKR077W CAF4P36130 643 aa1.89□□□□□ -2.11
MSA2YKR077W YFL019CP43576 117 aa1.89□□□□□ -2.11
MSA2YKR077W VPS71Q03433 280 aa1.89□□□□□ -2.11
MSA2YKR077W GRX3Q03835 250 aa1.89□□□□□ -2.11
MSA2YKR077W YDL085C-AQ3E7B7 68 aaKnown RBP1.89□□□□□ -2.11
MSA2YKR077W NSP1P14907 823 aaKnown RBP1.88□□□□□ -2.11
MSA2YKR077W TAH1P25638 111 aaPredicted RBP1.88□□□□□ -2.11
MSA2YKR077W ADE1P27616 306 aa1.88□□□□□ -2.11
MSA2YKR077W RPB7P34087 171 aa1.88□□□□□ -2.11
MSA2YKR077W SFK1P35735 353 aa1.88□□□□□ -2.11
MSA2YKR077W NOC4Q06512 552 aaPredicted RBP1.88□□□□□ -2.11
MSA2YKR077W IDP1P21954 428 aaKnown RBP1.87□□□□□ -2.11
MSA2YKR077W ARO7P32178 256 aa1.87□□□□□ -2.11
MSA2YKR077W SPC25P40014 221 aa1.87□□□□□ -2.11
MSA2YKR077W YMR007WQ03675 126 aa1.87□□□□□ -2.11
MSA2YKR077W ACC1Q00955 2233 aaKnown RBP1.86□□□□□ -2.11
MSA2YKR077W FAS1P07149 2051 aaKnown RBP1.86□□□□□ -2.11
MSA2YKR077W RPS24AP0CX31 135 aaKnown RBP1.86□□□□□ -2.11
MSA2YKR077W RPS24BP0CX32 135 aaKnown RBP1.86□□□□□ -2.11
MSA2YKR077W TRX3P25372 127 aa1.86□□□□□ -2.11
MSA2YKR077W GSP2P32836 220 aaKnown RBP1.86□□□□□ -2.11
MSA2YKR077W YEL008WP40001 126 aa1.86□□□□□ -2.11
MSA2YKR077W ALB1P47019 175 aaPredicted RBP1.86□□□□□ -2.11
MSA2YKR077W UPS3Q04006 179 aa1.86□□□□□ -2.11
MSA2YKR077W YPR014CQ6B0W2 109 aa1.86□□□□□ -2.11
MSA2YKR077W APA2P22108 325 aa1.85□□□□□ -2.11
MSA2YKR077W YCL042WP25572 119 aa1.85□□□□□ -2.11
MSA2YKR077W PGA1P53896 198 aa1.85□□□□□ -2.11
MSA2YKR077W NSG1P38837 291 aa1.84□□□□□ -2.11
MSA2YKR077W GPI14P47088 403 aaKnown RBP1.84□□□□□ -2.11
MSA2YKR077W RPL37AP49166 88 aaKnown RBP1.84□□□□□ -2.11
MSA2YKR077W DIG2Q03373 323 aaKnown RBP1.84□□□□□ -2.11
MSA2YKR077W AIM34Q03673 198 aa1.84□□□□□ -2.11
MSA2YKR077W YOR342CQ12182 319 aa1.84□□□□□ -2.11
MSA2YKR077W GRX8Q05926 109 aa1.83□□□□□ -2.12
MSA2YKR077W YLR412C-AQ3E742 68 aa1.83□□□□□ -2.12
MSA2YKR077W QCR6P00127 147 aa1.82□□□□□ -2.12
MSA2YKR077W SHG1P38337 142 aa1.82□□□□□ -2.12
MSA2YKR077W HUA1P40325 198 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 143.7 ms