RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN1	YHR027C	ERG8	P24521	451 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	PCL1	P24867	279 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	YKL107W	P34251	309 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	TEM1	P38987	245 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	LTP1	P40347	161 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	HAC1	P41546	238 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	PDR16	P53860	351 aa	Known RBP	2.74	□□□□□ -1.97
RPN1	YHR027C	BUD25	P85052	153 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	RPL34A	P87262	121 aa	Predicted RBP	2.74	□□□□□ -1.97
RPN1	YHR027C	YMR210W	Q03649	449 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	AIM34	Q03673	198 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	GRH1	Q04410	372 aa	Known RBP	2.74	□□□□□ -1.97
RPN1	YHR027C	STP3	Q05937	343 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	HSP33	Q08914	237 aa	Known RBP	2.74	□□□□□ -1.97
RPN1	YHR027C	FCY22	Q12119	530 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	USB1	Q12208	290 aa	Known RBP	2.74	□□□□□ -1.97
RPN1	YHR027C	POC4	Q12245	148 aa	Predicted RBP	2.74	□□□□□ -1.97
RPN1	YHR027C	UTP23	Q12339	254 aa	Known RBP	2.74	□□□□□ -1.97
RPN1	YHR027C	POM34	Q12445	299 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	CCH1	P50077	2039 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	COX5A	P00424	153 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	MRS4	P23500	304 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	YKL071W	P36086	256 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	RPL14A	P36105	138 aa	Known RBP	2.74	□□□□□ -1.97
RPN1	YHR027C	YBR292C	P38357	123 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	AIR1	P40507	360 aa	Known RBP	2.74	□□□□□ -1.97
RPN1	YHR027C	YJL213W	P40896	331 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	CIN2	P46670	268 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	HIT1	P46973	164 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	TIM10	P87108	93 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	SNO4	Q04902	237 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	HSP32	Q08992	237 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	ATO3	Q12359	275 aa		2.74	□□□□□ -1.97
RPN1	YHR027C	YLR415C	O13578	112 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	MSI1	P13712	422 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	TRX3	P25372	127 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	GRX1	P25373	110 aa	Known RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	NFS1	P25374	497 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	YHR138C	P38841	114 aa	Predicted RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	CAB4	P53332	305 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU4	P53427	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	RPL21A	Q02753	160 aa	Known RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	NUP53	Q03790	475 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	ENB1	Q08299	606 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	YPR071W	Q12346	211 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	JID1	Q12350	301 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	RPL21B	Q12672	160 aa	Known RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	URA5	P13298	226 aa	Known RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	KRE1	P17260	313 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	HYP2	P23301	157 aa	Known RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	NUD1	P32336	851 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	TRM7	P38238	310 aa	Known RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	YBR090C	P38253	122 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	RPB11	P38902	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	TIF34	P40217	347 aa	Known RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	RPS10B	P46784	105 aa	Known RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	YIP1	P53039	248 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	YNR040W	P53736	256 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	TGL2	P54857	326 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	MET31	Q03081	177 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	DGA1	Q08650	418 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	RPS10A	Q08745	105 aa	Predicted RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	YCR024C-B	Q3E7Z8	88 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	YLR149C	Q99296	730 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU1	P0CE88	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU14	P0CE89	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU6	P0CE90	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU18	P0CE91	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU8	P0CE92	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU11	P0CE93	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	GLN3	P18494	730 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	ERG4	P25340	473 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	IDH2	P28241	369 aa	Known RBP	2.73	□□□□□ -1.97
RPN1	YHR027C	GCS1	P35197	352 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	CMC1	P36064	111 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU13	P38725	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	YIL169C	P40442	995 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	YPL062W	Q02781	134 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU10	Q03050	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	BET5	Q03630	159 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU20	Q08322	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	PAU9	Q3E770	120 aa		2.73	□□□□□ -1.97
RPN1	YHR027C	MRS1	P07266	363 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	HMRA1	P0CY11	126 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	PRE2	P30656	287 aa	Known RBP	2.72	□□□□□ -1.97
RPN1	YHR027C	SPS18	P32572	300 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	GPX1	P36014	167 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	YKR070W	P36151	352 aa	Known RBP	2.72	□□□□□ -1.97
RPN1	YHR027C	FRM2	P37261	193 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	ADH5	P38113	351 aa	Known RBP	2.72	□□□□□ -1.97
RPN1	YHR027C	ARC40	P38328	384 aa	Known RBP	2.72	□□□□□ -1.97
RPN1	YHR027C	YHR097C	P38809	366 aa	Known RBP	2.72	□□□□□ -1.97
RPN1	YHR027C	ECM14	P38836	430 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	SAS2	P40963	338 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	YMR206W	Q03695	313 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	YMR082C	Q04276	118 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	CRD1	Q07560	283 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	YBL112C	Q3E7Y4	105 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	YCL012C	Q8J0M4	134 aa		2.72	□□□□□ -1.97
RPN1	YHR027C	YPT1	P01123	206 aa	Known RBP	2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms