RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeast

Gene SKI6, Length 741 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI6	YGR195W	PTH1	P38876	190 aa	Known RBP	4.17	□□□□□ -1.74
SKI6	YGR195W	GGC1	P38988	300 aa		4.17	□□□□□ -1.74
SKI6	YGR195W	GPI14	P47088	403 aa	Known RBP	4.17	□□□□□ -1.74
SKI6	YGR195W	INP1	Q03694	420 aa		4.17	□□□□□ -1.74
SKI6	YGR195W	YDR115W	Q04598	105 aa		4.17	□□□□□ -1.74
SKI6	YGR195W	YOR289W	Q12012	251 aa	Predicted RBP	4.17	□□□□□ -1.74
SKI6	YGR195W	TSC3	Q3E790	80 aa		4.17	□□□□□ -1.74
SKI6	YGR195W	AUS1	Q08409	1394 aa		4.16	□□□□□ -1.74
SKI6	YGR195W	RPS8A	P0CX39	200 aa	Known RBP	4.16	□□□□□ -1.74
SKI6	YGR195W	RPS8B	P0CX40	200 aa	Known RBP	4.16	□□□□□ -1.74
SKI6	YGR195W	TFC1	P32367	649 aa		4.16	□□□□□ -1.74
SKI6	YGR195W	SKG1	P36169	355 aa		4.16	□□□□□ -1.74
SKI6	YGR195W	FMP23	P38231	175 aa		4.16	□□□□□ -1.74
SKI6	YGR195W	YGP1	P38616	354 aa	Known RBP	4.16	□□□□□ -1.74
SKI6	YGR195W	HPM1	P40481	377 aa		4.16	□□□□□ -1.74
SKI6	YGR195W	ARP3	P47117	449 aa	Known RBP	4.16	□□□□□ -1.74
SKI6	YGR195W	XPT1	P47165	209 aa		4.16	□□□□□ -1.74
SKI6	YGR195W	YLR179C	Q06252	201 aa	Known RBP	4.16	□□□□□ -1.74
SKI6	YGR195W	HRD1	Q08109	551 aa		4.16	□□□□□ -1.74
SKI6	YGR195W	AKR2	Q12013	749 aa		4.16	□□□□□ -1.74
SKI6	YGR195W	YAL063C-A	Q3E791	96 aa		4.16	□□□□□ -1.74
SKI6	YGR195W	APC1	P53886	1748 aa		4.15	□□□□□ -1.74
SKI6	YGR195W	CKS1	P20486	150 aa	Known RBP	4.15	□□□□□ -1.75
SKI6	YGR195W	STP22	P25604	385 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	AIM2	P39721	246 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	MIC19	P43594	170 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	BOR1	P53838	576 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	TIM8	P57744	87 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	COF1	Q03048	143 aa	Known RBP	4.15	□□□□□ -1.75
SKI6	YGR195W	GAS3	Q03655	524 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	LPP1	Q04396	274 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	GRH1	Q04410	372 aa	Known RBP	4.15	□□□□□ -1.75
SKI6	YGR195W	YMR320W	Q04897	101 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	PAL1	Q05518	499 aa	Known RBP	4.15	□□□□□ -1.75
SKI6	YGR195W	NKP2	Q06162	153 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	IES4	Q08561	116 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	YPL264C	Q08980	353 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	YPL162C	Q12042	273 aa		4.15	□□□□□ -1.75
SKI6	YGR195W	YLR462W	O13556	202 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	YOR304C-A	O14468	76 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	VMA7	P39111	118 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	TIM17	P39515	158 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	YEL075C	P39972	122 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	RFC2	P40348	353 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	DLS1	P40366	167 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	YIL054W	P40524	105 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	OST2	P46964	130 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	YJL028W	P47062	111 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	SOL1	P50278	321 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	YGL088W	P53151	121 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	HHO1	P53551	258 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	YDR366C	P87287	132 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	FMN1	Q03778	218 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	CNL1	Q06333	122 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	PRR2	Q12310	699 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	PST1	Q12355	444 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	YIR021W-A	Q3E739	70 aa		4.14	□□□□□ -1.75
SKI6	YGR195W	USO1	P25386	1790 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	PET9	P18239	318 aa	Known RBP	4.13	□□□□□ -1.75
SKI6	YGR195W	SFC1	P33303	322 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	TEM1	P38987	245 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	AVT2	P39981	480 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	RGI1	P40043	161 aa	Predicted RBP	4.13	□□□□□ -1.75
SKI6	YGR195W	GLC8	P41818	229 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	YGL118C	P53132	145 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	THI74	Q04083	370 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	EMI1	Q04406	187 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	MRX8	Q05473	314 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	PBA1	Q05778	276 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	YOR376W	Q08900	122 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	YOR342C	Q12182	319 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	YDL180W	Q12301	547 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	YBR298C-A	Q8TGK4	73 aa		4.13	□□□□□ -1.75
SKI6	YGR195W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.12	□□□□□ -1.75
SKI6	YGR195W	YEL009C-A	A0A023PZF2	135 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	ADH3	P07246	375 aa	Known RBP	4.12	□□□□□ -1.75
SKI6	YGR195W	RPL30	P14120	105 aa	Known RBP	4.12	□□□□□ -1.75
SKI6	YGR195W	SEC17	P32602	292 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	OM14	P38325	134 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	RPS20	P38701	121 aa	Known RBP	4.12	□□□□□ -1.75
SKI6	YGR195W	RPF1	P38805	295 aa	Known RBP	4.12	□□□□□ -1.75
SKI6	YGR195W	IRC22	P40006	225 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	YPL073C	P40323	161 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	YGR039W	P53225	103 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	APS2	Q00381	147 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	YMR244W	Q04018	355 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	API2	Q04413	109 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	NIP7	Q08962	181 aa	Known RBP	4.12	□□□□□ -1.75
SKI6	YGR195W	TIM22	Q12328	207 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	YFR032C-B	Q8TGU2	87 aa		4.12	□□□□□ -1.75
SKI6	YGR195W	YPR170W-B	P0C5R9	85 aa		4.11	□□□□□ -1.75
SKI6	YGR195W	ZRT3	P34240	503 aa		4.11	□□□□□ -1.75
SKI6	YGR195W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SKI6	YGR195W	POP4	P38336	279 aa		4.11	□□□□□ -1.75
SKI6	YGR195W	SYS1	P41544	203 aa		4.11	□□□□□ -1.75
SKI6	YGR195W	ERJ5	P43613	295 aa	Predicted RBP	4.11	□□□□□ -1.75
SKI6	YGR195W	TSA2	Q04120	196 aa		4.11	□□□□□ -1.75
SKI6	YGR195W	YPL225W	Q08971	146 aa	Known RBP	4.11	□□□□□ -1.75
SKI6	YGR195W	SMT3	Q12306	101 aa	Known RBP	4.11	□□□□□ -1.75
SKI6	YGR195W	GEP5	Q12393	293 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms