RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W SGF73P53165 657 aa2.87□□□□□ -1.95
USE1YGL098W YGR045CP53229 120 aa2.87□□□□□ -1.95
USE1YGL098W YNL034WP53963 612 aa2.87□□□□□ -1.95
USE1YGL098W SLG1P54867 378 aa2.87□□□□□ -1.95
USE1YGL098W SPG3Q04398 127 aaPredicted RBP2.87□□□□□ -1.95
USE1YGL098W YML053CQ04978 212 aa2.87□□□□□ -1.95
USE1YGL098W SYM1Q06563 197 aa2.87□□□□□ -1.95
USE1YGL098W ARR3Q06598 404 aa2.87□□□□□ -1.95
USE1YGL098W IRC13Q08630 104 aa2.87□□□□□ -1.95
USE1YGL098W PFA4Q12006 378 aa2.87□□□□□ -1.95
USE1YGL098W YPR071WQ12346 211 aa2.87□□□□□ -1.95
USE1YGL098W PEX11Q12462 236 aa2.87□□□□□ -1.95
USE1YGL098W YIL102C-AQ2V2P5 75 aa2.87□□□□□ -1.95
USE1YGL098W RPS22BQ3E7Y3 130 aaKnown RBP2.87□□□□□ -1.95
USE1YGL098W YOS1Q3E834 85 aa2.87□□□□□ -1.95
USE1YGL098W YLR422WQ06409 1932 aa2.87□□□□□ -1.95
USE1YGL098W HKR1P41809 1802 aa2.86□□□□□ -1.95
USE1YGL098W CDC21P06785 304 aa2.86□□□□□ -1.95
USE1YGL098W GAL7P08431 366 aa2.86□□□□□ -1.95
USE1YGL098W YKR104WP0CE69 306 aa2.86□□□□□ -1.95
USE1YGL098W POX1P13711 748 aa2.86□□□□□ -1.95
USE1YGL098W CBS1P14066 229 aa2.86□□□□□ -1.95
USE1YGL098W ADK2P26364 225 aa2.86□□□□□ -1.95
USE1YGL098W HXT4P32467 576 aa2.86□□□□□ -1.95
USE1YGL098W SPS18P32572 300 aa2.86□□□□□ -1.95
USE1YGL098W MCR1P36060 302 aaKnown RBP2.86□□□□□ -1.95
USE1YGL098W YKR070WP36151 352 aaKnown RBP2.86□□□□□ -1.95
USE1YGL098W SDS24P38314 527 aa2.86□□□□□ -1.95
USE1YGL098W ARC40P38328 384 aaKnown RBP2.86□□□□□ -1.95
USE1YGL098W TEM1P38987 245 aa2.86□□□□□ -1.95
USE1YGL098W UME6P39001 836 aa2.86□□□□□ -1.95
USE1YGL098W PSD1P39006 500 aa2.86□□□□□ -1.95
USE1YGL098W YER121WP40076 114 aa2.86□□□□□ -1.95
USE1YGL098W YER134CP40081 178 aa2.86□□□□□ -1.95
USE1YGL098W YNL198CP40166 100 aa2.86□□□□□ -1.95
USE1YGL098W OSW5P40219 148 aa2.86□□□□□ -1.95
USE1YGL098W YFL065CP43539 102 aa2.86□□□□□ -1.95
USE1YGL098W COQ5P49017 307 aa2.86□□□□□ -1.95
USE1YGL098W MIC27P50945 234 aa2.86□□□□□ -1.95
USE1YGL098W SCW4P53334 386 aaKnown RBP2.86□□□□□ -1.95
USE1YGL098W ALG9P53868 555 aaKnown RBP2.86□□□□□ -1.95
USE1YGL098W YLR460CP54007 376 aa2.86□□□□□ -1.95
USE1YGL098W YMR210WQ03649 449 aa2.86□□□□□ -1.95
USE1YGL098W INP1Q03694 420 aa2.86□□□□□ -1.95
USE1YGL098W RIM9Q04734 239 aa2.86□□□□□ -1.95
USE1YGL098W DPP1Q05521 289 aa2.86□□□□□ -1.95
USE1YGL098W YTH1Q06102 208 aaPredicted RBP2.86□□□□□ -1.95
USE1YGL098W CDD1Q06549 142 aa2.86□□□□□ -1.95
USE1YGL098W YPR203WQ08994 102 aa2.86□□□□□ -1.95
USE1YGL098W RRG1Q12167 365 aaPredicted RBP2.86□□□□□ -1.95
USE1YGL098W YPR011CQ12251 326 aa2.86□□□□□ -1.95
USE1YGL098W MCT1Q12283 360 aa2.86□□□□□ -1.95
USE1YGL098W NPC2Q12408 173 aa2.86□□□□□ -1.95
USE1YGL098W ISD11Q6Q560 94 aa2.86□□□□□ -1.95
USE1YGL098W SLH1P53327 1967 aaKnown RBP2.86□□□□□ -1.95
USE1YGL098W HEM4P06174 275 aa2.85□□□□□ -1.95
USE1YGL098W YBR121C-AP0C5L4 52 aa2.85□□□□□ -1.95
USE1YGL098W YAR066WP0CX18 203 aa2.85□□□□□ -1.95
USE1YGL098W YHR214WP0CX19 203 aa2.85□□□□□ -1.95
USE1YGL098W SEC11P15367 167 aa2.85□□□□□ -1.95
USE1YGL098W GLN3P18494 730 aa2.85□□□□□ -1.95
USE1YGL098W MCK1P21965 375 aaKnown RBP2.85□□□□□ -1.95
USE1YGL098W SCO1P23833 295 aa2.85□□□□□ -1.95
USE1YGL098W TIR2P33890 251 aa2.85□□□□□ -1.95
USE1YGL098W YKL107WP34251 309 aa2.85□□□□□ -1.95
USE1YGL098W YOR062CP36025 268 aa2.85□□□□□ -1.95
USE1YGL098W INM1P38710 295 aa2.85□□□□□ -1.95
USE1YGL098W VPS25P47142 202 aa2.85□□□□□ -1.95
USE1YGL098W BXI1P48558 297 aa2.85□□□□□ -1.95
USE1YGL098W MTC3P53077 123 aa2.85□□□□□ -1.95
USE1YGL098W MPP6P53725 186 aaPredicted RBP2.85□□□□□ -1.95
USE1YGL098W YNL143CP53908 130 aa2.85□□□□□ -1.95
USE1YGL098W BUD25P85052 153 aa2.85□□□□□ -1.95
USE1YGL098W RPL21AQ02753 160 aaKnown RBP2.85□□□□□ -1.95
USE1YGL098W YML122CQ03207 126 aa2.85□□□□□ -1.95
USE1YGL098W IZH1Q03419 316 aa2.85□□□□□ -1.95
USE1YGL098W YMR082CQ04276 118 aa2.85□□□□□ -1.95
USE1YGL098W YMR090WQ04304 227 aaKnown RBP2.85□□□□□ -1.95
USE1YGL098W GRH1Q04410 372 aaKnown RBP2.85□□□□□ -1.95
USE1YGL098W YDL242WQ07746 117 aa2.85□□□□□ -1.95
USE1YGL098W YOR105WQ08504 108 aa2.85□□□□□ -1.95
USE1YGL098W NDD1Q08887 554 aa2.85□□□□□ -1.95
USE1YGL098W PRM3Q08931 133 aa2.85□□□□□ -1.95
USE1YGL098W YDL177CQ12257 170 aa2.85□□□□□ -1.95
USE1YGL098W RPL21BQ12672 160 aaKnown RBP2.85□□□□□ -1.95
USE1YGL098W YLR149CQ99296 730 aa2.85□□□□□ -1.95
USE1YGL098W YDR157WA0A023PZE8 133 aa2.84□□□□□ -1.95
USE1YGL098W RPS13P05756 151 aaKnown RBP2.84□□□□□ -1.95
USE1YGL098W STE7P06784 515 aa2.84□□□□□ -1.95
USE1YGL098W MRS1P07266 363 aa2.84□□□□□ -1.95
USE1YGL098W RPS22AP0C0W1 130 aaKnown RBP2.84□□□□□ -1.95
USE1YGL098W RPL1AP0CX43 217 aaKnown RBP2.84□□□□□ -1.95
USE1YGL098W RPL1BP0CX44 217 aaKnown RBP2.84□□□□□ -1.95
USE1YGL098W RPL12AP0CX53 165 aaKnown RBP2.84□□□□□ -1.95
USE1YGL098W RPL12BP0CX54 165 aa2.84□□□□□ -1.95
USE1YGL098W SPO13P23624 291 aa2.84□□□□□ -1.95
USE1YGL098W IDH2P28241 369 aaKnown RBP2.84□□□□□ -1.95
USE1YGL098W ECM15P35195 104 aa2.84□□□□□ -1.95
USE1YGL098W GPX1P36014 167 aa2.84□□□□□ -1.95
USE1YGL098W YKL071WP36086 256 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 108.3 ms