RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W FUS2Q05670 677 aa1.16□□□□□ -2.22
LOC1YFR001W YAR023CD6VPM8 179 aa1.15□□□□□ -2.23
LOC1YFR001W MRS1P07266 363 aa1.15□□□□□ -2.23
LOC1YFR001W NSP1P14907 823 aaKnown RBP1.15□□□□□ -2.23
LOC1YFR001W NTG1P31378 399 aa1.15□□□□□ -2.23
LOC1YFR001W YER134CP40081 178 aa1.15□□□□□ -2.23
LOC1YFR001W YFH7P43591 353 aa1.15□□□□□ -2.23
LOC1YFR001W ARP3P47117 449 aaKnown RBP1.15□□□□□ -2.23
LOC1YFR001W DAD4P69851 72 aa1.15□□□□□ -2.23
LOC1YFR001W YMR099CQ03161 297 aaKnown RBP1.15□□□□□ -2.23
LOC1YFR001W IRC23Q08416 157 aa1.15□□□□□ -2.23
LOC1YFR001W YHR212W-AP0CX91 67 aa1.14□□□□□ -2.23
LOC1YFR001W MATALPHA2P0CY08 210 aa1.14□□□□□ -2.23
LOC1YFR001W HMLALPHA2P0CY09 210 aa1.14□□□□□ -2.23
LOC1YFR001W YHL018WP38744 120 aaPredicted RBP1.14□□□□□ -2.23
LOC1YFR001W RFC4P40339 323 aaKnown RBP1.14□□□□□ -2.23
LOC1YFR001W MMS2P53152 137 aa1.14□□□□□ -2.23
LOC1YFR001W MRPS17Q03246 237 aaPredicted RBP1.14□□□□□ -2.23
LOC1YFR001W YMR007WQ03675 126 aa1.14□□□□□ -2.23
LOC1YFR001W RNH202Q05635 350 aa1.14□□□□□ -2.23
LOC1YFR001W YPK2P18961 677 aa1.13□□□□□ -2.23
LOC1YFR001W YKT6P36015 200 aaKnown RBP1.13□□□□□ -2.23
LOC1YFR001W HPA3P39979 161 aa1.13□□□□□ -2.23
LOC1YFR001W YMR295CQ03559 197 aa1.13□□□□□ -2.23
LOC1YFR001W YMR252CQ04814 134 aa1.13□□□□□ -2.23
LOC1YFR001W PRP11Q07350 266 aaPredicted RBP1.13□□□□□ -2.23
LOC1YFR001W YOL014WQ08110 124 aa1.13□□□□□ -2.23
LOC1YFR001W ABP140Q08641 628 aaKnown RBP1.13□□□□□ -2.23
LOC1YFR001W QCR7P00128 127 aa1.12□□□□□ -2.23
LOC1YFR001W PHO85P17157 305 aa1.12□□□□□ -2.23
LOC1YFR001W YJR111CP47148 283 aaKnown RBP1.12□□□□□ -2.23
LOC1YFR001W UBC12P52491 188 aa1.12□□□□□ -2.23
LOC1YFR001W NOP19P53317 196 aaPredicted RBP1.12□□□□□ -2.23
LOC1YFR001W SHH3Q04487 196 aa1.12□□□□□ -2.23
LOC1YFR001W COX8P04039 78 aa1.11□□□□□ -2.23
LOC1YFR001W YEL008WP40001 126 aa1.11□□□□□ -2.23
LOC1YFR001W FIT2Q08906 153 aa1.11□□□□□ -2.23
LOC1YFR001W YPR013CQ12145 317 aa1.11□□□□□ -2.23
LOC1YFR001W RPB7P34087 171 aa1.1□□□□□ -2.23
LOC1YFR001W MTW1P39731 289 aa1.1□□□□□ -2.23
LOC1YFR001W HUA1P40325 198 aa1.1□□□□□ -2.23
LOC1YFR001W YNL184CP53876 108 aa1.1□□□□□ -2.23
LOC1YFR001W YMR315WQ04869 349 aaKnown RBP1.1□□□□□ -2.23
LOC1YFR001W NAT3Q06504 195 aa1.1□□□□□ -2.23
LOC1YFR001W YLR031WQ07978 186 aa1.1□□□□□ -2.23
LOC1YFR001W GET4Q12125 312 aa1.1□□□□□ -2.23
LOC1YFR001W YML100W-AQ8TGT0 57 aa1.1□□□□□ -2.23
LOC1YFR001W JIP3O13555 125 aa1.09□□□□□ -2.23
LOC1YFR001W TIR1P10863 254 aa1.09□□□□□ -2.23
LOC1YFR001W YCL042WP25572 119 aa1.09□□□□□ -2.23
LOC1YFR001W PAM17P36147 197 aa1.09□□□□□ -2.23
LOC1YFR001W TDA4P47153 279 aa1.09□□□□□ -2.23
LOC1YFR001W THG1P53215 237 aaKnown RBP1.09□□□□□ -2.23
LOC1YFR001W ARO80Q04052 950 aa1.09□□□□□ -2.23
LOC1YFR001W YLR036CQ07986 203 aa1.09□□□□□ -2.23
LOC1YFR001W MGT1P26188 188 aa1.08□□□□□ -2.24
LOC1YFR001W FMP23P38231 175 aa1.08□□□□□ -2.24
LOC1YFR001W YNL033WP53964 284 aa1.08□□□□□ -2.24
LOC1YFR001W IGO2Q9P305 131 aa1.08□□□□□ -2.24
LOC1YFR001W SNF4P12904 322 aa1.07□□□□□ -2.24
LOC1YFR001W CWC21Q03375 135 aaKnown RBP1.07□□□□□ -2.24
LOC1YFR001W YMR253CQ04835 414 aa1.07□□□□□ -2.24
LOC1YFR001W ADF1Q2V2Q1 113 aa1.07□□□□□ -2.24
LOC1YFR001W COA3Q3E7B2 85 aa1.07□□□□□ -2.24
LOC1YFR001W YER188C-AP0C0V2 99 aa1.06□□□□□ -2.24
LOC1YFR001W ARO7P32178 256 aa1.06□□□□□ -2.24
LOC1YFR001W SFK1P35735 353 aa1.06□□□□□ -2.24
LOC1YFR001W SPC25P40014 221 aa1.06□□□□□ -2.24
LOC1YFR001W CUP9P41817 306 aa1.06□□□□□ -2.24
LOC1YFR001W RPL37BP51402 88 aaKnown RBP1.06□□□□□ -2.24
LOC1YFR001W CGR1P53188 120 aa1.06□□□□□ -2.24
LOC1YFR001W YLR460CP54007 376 aa1.06□□□□□ -2.24
LOC1YFR001W VPS71Q03433 280 aa1.06□□□□□ -2.24
LOC1YFR001W UPS3Q04006 179 aa1.06□□□□□ -2.24
LOC1YFR001W IDP1P21954 428 aaKnown RBP1.05□□□□□ -2.24
LOC1YFR001W GSP2P32836 220 aaKnown RBP1.05□□□□□ -2.24
LOC1YFR001W PDS1P40316 373 aaPredicted RBP1.05□□□□□ -2.24
LOC1YFR001W YFL019CP43576 117 aa1.05□□□□□ -2.24
LOC1YFR001W ALB1P47019 175 aaPredicted RBP1.05□□□□□ -2.24
LOC1YFR001W GPI14P47088 403 aaKnown RBP1.04□□□□□ -2.24
LOC1YFR001W RTC4P53850 401 aa1.04□□□□□ -2.24
LOC1YFR001W YOL024WQ08172 172 aa1.04□□□□□ -2.24
LOC1YFR001W TMA22P47089 198 aaPredicted RBP1.03□□□□□ -2.24
LOC1YFR001W TAH1P25638 111 aaPredicted RBP1.02□□□□□ -2.25
LOC1YFR001W ADE1P27616 306 aa1.02□□□□□ -2.25
LOC1YFR001W DIG2Q03373 323 aaKnown RBP1.02□□□□□ -2.25
LOC1YFR001W YLR422WQ06409 1932 aa1.02□□□□□ -2.25
LOC1YFR001W RPS24AP0CX31 135 aaKnown RBP1.01□□□□□ -2.25
LOC1YFR001W RPS24BP0CX32 135 aaKnown RBP1.01□□□□□ -2.25
LOC1YFR001W YCR023CP25351 611 aa1.01□□□□□ -2.25
LOC1YFR001W PGA1P53896 198 aa1.01□□□□□ -2.25
LOC1YFR001W MET31Q03081 177 aa1.01□□□□□ -2.25
LOC1YFR001W YDR391CQ04170 232 aa1.01□□□□□ -2.25
LOC1YFR001W LCL2Q08045 131 aa1.01□□□□□ -2.25
LOC1YFR001W FYV12Q08559 129 aa1.01□□□□□ -2.25
LOC1YFR001W YDL085C-AQ3E7B7 68 aaKnown RBP1.01□□□□□ -2.25
LOC1YFR001W RAD9P14737 1309 aa1□□□□□ -2.25
LOC1YFR001W SEN2P16658 377 aa1□□□□□ -2.25
LOC1YFR001W MRPL15P36523 253 aa1□□□□□ -2.25
LOC1YFR001W RRP17Q04031 235 aaPredicted RBP1□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms