RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	YPS6	P40583	537 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	COX18	P53239	316 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	YGR117C	P53270	476 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	YLR152C	P54072	576 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	YPL077C	Q02831	240 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	NNK1	P36003	928 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	RPP1	P38786	293 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	HAC1	P41546	238 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	TSA2	Q04120	196 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	YPR174C	Q06616	221 aa	Predicted RBP	4.75	□□□□□ -1.65
VTC2	YFL004W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
VTC2	YFL004W	YLR363W-A	Q3E747	85 aa		4.75	□□□□□ -1.65
VTC2	YFL004W	SPT15	P13393	240 aa	Known RBP	4.74	□□□□□ -1.65
VTC2	YFL004W	GEX1	P25596	615 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	SSH4	P32343	579 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	ECM33	P38248	429 aa	Known RBP	4.74	□□□□□ -1.65
VTC2	YFL004W	YHL026C	P38740	315 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	PSD1	P39006	500 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	YND1	P40009	630 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	GPP2	P40106	250 aa	Known RBP	4.74	□□□□□ -1.65
VTC2	YFL004W	PCL7	P40186	285 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	YIL169C	P40442	995 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	SEC24	P40482	926 aa	Known RBP	4.74	□□□□□ -1.65
VTC2	YFL004W	MSL1	P40567	111 aa	Predicted RBP	4.74	□□□□□ -1.65
VTC2	YFL004W	BOR1	P53838	576 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	PIR1	Q03178	341 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	NAT3	Q06504	195 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	RKI1	Q12189	258 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	MSB2	P32334	1306 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	YDR157W	A0A023PZE8	133 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	ADH1	P00330	348 aa	Known RBP	4.74	□□□□□ -1.65
VTC2	YFL004W	COX1	P00401	534 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	SEC4	P07560	215 aa	Known RBP	4.74	□□□□□ -1.65
VTC2	YFL004W	POX1	P13711	748 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	MDH2	P22133	377 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	GAS1	P22146	559 aa	Known RBP	4.74	□□□□□ -1.65
VTC2	YFL004W	TIM12	P32830	109 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	YKL071W	P36086	256 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	TAE1	P38340	232 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	YFR020W	P43600	232 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	PMT3	P47190	753 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	YMR090W	Q04304	227 aa	Known RBP	4.74	□□□□□ -1.65
VTC2	YFL004W	RPL7B	Q12213	244 aa	Known RBP	4.74	□□□□□ -1.65
VTC2	YFL004W	YCR024C-B	Q3E7Z8	88 aa		4.74	□□□□□ -1.65
VTC2	YFL004W	SGE1	P33335	543 aa		4.73	□□□□□ -1.65
VTC2	YFL004W	SOR1	P35497	357 aa	Known RBP	4.73	□□□□□ -1.65
VTC2	YFL004W	FYV4	P38783	130 aa	Predicted RBP	4.73	□□□□□ -1.65
VTC2	YFL004W	SPG5	P42933	373 aa		4.73	□□□□□ -1.65
VTC2	YFL004W	MSO1	P53604	210 aa	Known RBP	4.73	□□□□□ -1.65
VTC2	YFL004W	SOR2	Q07786	357 aa		4.73	□□□□□ -1.65
VTC2	YFL004W	NPC2	Q12408	173 aa		4.73	□□□□□ -1.65
VTC2	YFL004W	MEK1	P24719	497 aa	Predicted RBP	4.73	□□□□□ -1.65
VTC2	YFL004W	YKL107W	P34251	309 aa		4.73	□□□□□ -1.65
VTC2	YFL004W	OGG1	P53397	376 aa	Predicted RBP	4.73	□□□□□ -1.65
VTC2	YFL004W	YNL092W	P53934	400 aa		4.73	□□□□□ -1.65
VTC2	YFL004W	PRP11	Q07350	266 aa	Predicted RBP	4.73	□□□□□ -1.65
VTC2	YFL004W	YOR105W	Q08504	108 aa		4.73	□□□□□ -1.65
VTC2	YFL004W	YOR387C	Q08910	206 aa		4.73	□□□□□ -1.65
VTC2	YFL004W	ATO3	Q12359	275 aa		4.73	□□□□□ -1.65
VTC2	YFL004W	YPT1	P01123	206 aa	Known RBP	4.72	□□□□□ -1.65
VTC2	YFL004W	RPS13	P05756	151 aa	Known RBP	4.72	□□□□□ -1.65
VTC2	YFL004W	CPR2	P23285	205 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	HMX1	P32339	317 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	GPX1	P36014	167 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	SHB17	P36136	271 aa	Known RBP	4.72	□□□□□ -1.65
VTC2	YFL004W	GPI2	P46961	280 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	EOS1	P53938	366 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	ALG6	Q12001	544 aa	Known RBP	4.72	□□□□□ -1.65
VTC2	YFL004W	YOS1	Q3E834	85 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	SCS22	Q6Q595	175 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	CTA1	P15202	515 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	YKR070W	P36151	352 aa	Known RBP	4.72	□□□□□ -1.65
VTC2	YFL004W	TRM7	P38238	310 aa	Known RBP	4.72	□□□□□ -1.65
VTC2	YFL004W	ELO1	P39540	310 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	YJL163C	P46996	555 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	ERG26	P53199	349 aa	Known RBP	4.72	□□□□□ -1.65
VTC2	YFL004W	CAB4	P53332	305 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	GRH1	Q04410	372 aa	Known RBP	4.72	□□□□□ -1.65
VTC2	YFL004W	YPR117W	Q06116	2489 aa		4.72	□□□□□ -1.65
VTC2	YFL004W	RPS22A	P0C0W1	130 aa	Known RBP	4.71	□□□□□ -1.65
VTC2	YFL004W	ERG2	P32352	222 aa		4.71	□□□□□ -1.65
VTC2	YFL004W	RML2	P32611	393 aa		4.71	□□□□□ -1.65
VTC2	YFL004W	RAD23	P32628	398 aa	Known RBP	4.71	□□□□□ -1.65
VTC2	YFL004W	OM14	P38325	134 aa		4.71	□□□□□ -1.65
VTC2	YFL004W	MRPL51	Q06090	140 aa	Predicted RBP	4.71	□□□□□ -1.65
VTC2	YFL004W	THI72	Q08579	599 aa		4.71	□□□□□ -1.65
VTC2	YFL004W	FOL3	Q12676	427 aa	Predicted RBP	4.71	□□□□□ -1.65
VTC2	YFL004W	STF1	P01098	86 aa		4.71	□□□□□ -1.66
VTC2	YFL004W	RFA3	P26755	122 aa	Known RBP	4.71	□□□□□ -1.66
VTC2	YFL004W	SWD2	P36104	329 aa	Predicted RBP	4.71	□□□□□ -1.66
VTC2	YFL004W	MOB1	P40484	314 aa		4.71	□□□□□ -1.66
VTC2	YFL004W	ERJ5	P43613	295 aa	Predicted RBP	4.71	□□□□□ -1.66
VTC2	YFL004W	DYN2	Q02647	92 aa		4.71	□□□□□ -1.66
VTC2	YFL004W	HRT1	Q08273	121 aa		4.71	□□□□□ -1.66
VTC2	YFL004W	IRC13	Q08630	104 aa		4.71	□□□□□ -1.66
VTC2	YFL004W	YIL102C-A	Q2V2P5	75 aa		4.71	□□□□□ -1.66
VTC2	YFL004W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.71	□□□□□ -1.66
VTC2	YFL004W	YER190C-B	P0CX94	160 aa		4.7	□□□□□ -1.66
VTC2	YFL004W	YEL077W-A	P0CX95	160 aa		4.7	□□□□□ -1.66
VTC2	YFL004W	YGR296C-B	P0CX96	160 aa		4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms