RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W QCR9P22289 66 aa3.32□□□□□ -1.88
CHD1YER164W TIM12P32830 109 aa3.32□□□□□ -1.88
CHD1YER164W FRM2P37261 193 aa3.32□□□□□ -1.88
CHD1YER164W YHL044WP38727 235 aa3.32□□□□□ -1.88
CHD1YER164W BAT1P38891 393 aaKnown RBP3.32□□□□□ -1.88
CHD1YER164W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
CHD1YER164W FSH2Q05015 223 aa3.32□□□□□ -1.88
CHD1YER164W LAS17Q12446 633 aa3.32□□□□□ -1.88
CHD1YER164W PRP8P33334 2413 aaKnown RBP3.32□□□□□ -1.88
CHD1YER164W ADH1P00330 348 aaKnown RBP3.32□□□□□ -1.88
CHD1YER164W ERG24P32462 438 aaKnown RBP3.32□□□□□ -1.88
CHD1YER164W EMP70P32802 667 aa3.32□□□□□ -1.88
CHD1YER164W ECM14P38836 430 aa3.32□□□□□ -1.88
CHD1YER164W MSY1P48527 492 aa3.32□□□□□ -1.88
CHD1YER164W SUN4P53616 420 aa3.32□□□□□ -1.88
CHD1YER164W ERG13P54839 491 aaKnown RBP3.32□□□□□ -1.88
CHD1YER164W SMX3P54999 86 aaPredicted RBP3.32□□□□□ -1.88
CHD1YER164W RSF1Q05043 376 aa3.32□□□□□ -1.88
CHD1YER164W HRT1Q08273 121 aa3.32□□□□□ -1.88
CHD1YER164W YOP1Q12402 180 aa3.32□□□□□ -1.88
CHD1YER164W HEM4P06174 275 aa3.32□□□□□ -1.88
CHD1YER164W MATALPHA1P0CY06 175 aa3.32□□□□□ -1.88
CHD1YER164W HMLALPHA1P0CY07 175 aa3.32□□□□□ -1.88
CHD1YER164W MRS4P23500 304 aa3.32□□□□□ -1.88
CHD1YER164W PTP1P25044 335 aa3.32□□□□□ -1.88
CHD1YER164W FEN2P25621 512 aaKnown RBP3.32□□□□□ -1.88
CHD1YER164W APS1P35181 156 aa3.32□□□□□ -1.88
CHD1YER164W YHR138CP38841 114 aaPredicted RBP3.32□□□□□ -1.88
CHD1YER164W RNH201P53942 307 aa3.32□□□□□ -1.88
CHD1YER164W ELC1Q03071 99 aa3.32□□□□□ -1.88
CHD1YER164W COQ11Q05892 277 aa3.32□□□□□ -1.88
CHD1YER164W ILV5P06168 395 aaKnown RBP3.31□□□□□ -1.88
CHD1YER164W MSI1P13712 422 aa3.31□□□□□ -1.88
CHD1YER164W MTC7P32633 139 aa3.31□□□□□ -1.88
CHD1YER164W ECM15P35195 104 aa3.31□□□□□ -1.88
CHD1YER164W YBR013CP38215 129 aa3.31□□□□□ -1.88
CHD1YER164W ANS1P38832 159 aa3.31□□□□□ -1.88
CHD1YER164W HAC1P41546 238 aa3.31□□□□□ -1.88
CHD1YER164W YNL165WP53891 406 aa3.31□□□□□ -1.88
CHD1YER164W NIS1P53939 407 aa3.31□□□□□ -1.88
CHD1YER164W BUD25P85052 153 aa3.31□□□□□ -1.88
CHD1YER164W CTS2Q06350 511 aa3.31□□□□□ -1.88
CHD1YER164W MPD1Q12404 318 aaKnown RBP3.31□□□□□ -1.88
CHD1YER164W RPS22BQ3E7Y3 130 aaKnown RBP3.31□□□□□ -1.88
CHD1YER164W CHO1P08456 276 aa3.31□□□□□ -1.88
CHD1YER164W DAT1P13483 248 aaKnown RBP3.31□□□□□ -1.88
CHD1YER164W RPS27AP35997 82 aaKnown RBP3.31□□□□□ -1.88
CHD1YER164W MRPL27P36526 146 aaPredicted RBP3.31□□□□□ -1.88
CHD1YER164W FIG1P38224 298 aa3.31□□□□□ -1.88
CHD1YER164W YGP1P38616 354 aaKnown RBP3.31□□□□□ -1.88
CHD1YER164W RPS27BP38711 82 aa3.31□□□□□ -1.88
CHD1YER164W CYB5P40312 120 aa3.31□□□□□ -1.88
CHD1YER164W STP3Q05937 343 aa3.31□□□□□ -1.88
CHD1YER164W YPR098CQ06089 161 aa3.31□□□□□ -1.88
CHD1YER164W USB1Q12208 290 aaKnown RBP3.31□□□□□ -1.88
CHD1YER164W RAX2Q12465 1220 aa3.31□□□□□ -1.88
CHD1YER164W PUT1P09368 476 aa3.31□□□□□ -1.88
CHD1YER164W SHR5P41912 237 aa3.31□□□□□ -1.88
CHD1YER164W TEX1P53851 422 aaKnown RBP3.31□□□□□ -1.88
CHD1YER164W SWS2P53937 143 aa3.31□□□□□ -1.88
CHD1YER164W RHO3Q00245 231 aaKnown RBP3.31□□□□□ -1.88
CHD1YER164W LPP1Q04396 274 aa3.31□□□□□ -1.88
CHD1YER164W YLL053CP0CD98 152 aa3.3□□□□□ -1.88
CHD1YER164W DAL82P21705 255 aa3.3□□□□□ -1.88
CHD1YER164W AIM17P23180 465 aaKnown RBP3.3□□□□□ -1.88
CHD1YER164W PTH1P38876 190 aaKnown RBP3.3□□□□□ -1.88
CHD1YER164W POP2P39008 433 aa3.3□□□□□ -1.88
CHD1YER164W ELO1P39540 310 aa3.3□□□□□ -1.88
CHD1YER164W MST28P39552 234 aa3.3□□□□□ -1.88
CHD1YER164W ABF2Q02486 183 aa3.3□□□□□ -1.88
CHD1YER164W DYN2Q02647 92 aa3.3□□□□□ -1.88
CHD1YER164W EST3Q03096 181 aa3.3□□□□□ -1.88
CHD1YER164W BSC6Q08280 497 aa3.3□□□□□ -1.88
CHD1YER164W POM34Q12445 299 aa3.3□□□□□ -1.88
CHD1YER164W SCS22Q6Q595 175 aa3.3□□□□□ -1.88
CHD1YER164W GLT1Q12680 2145 aaKnown RBP3.3□□□□□ -1.88
CHD1YER164W RPS22AP0C0W1 130 aaKnown RBP3.3□□□□□ -1.88
CHD1YER164W ERV1P27882 189 aa3.3□□□□□ -1.88
CHD1YER164W NHP2P32495 156 aaPredicted RBP3.3□□□□□ -1.88
CHD1YER164W YKL107WP34251 309 aa3.3□□□□□ -1.88
CHD1YER164W NNK1P36003 928 aa3.3□□□□□ -1.88
CHD1YER164W SLM6P38343 150 aa3.3□□□□□ -1.88
CHD1YER164W SHO1P40073 367 aa3.3□□□□□ -1.88
CHD1YER164W YIL152WP40455 235 aa3.3□□□□□ -1.88
CHD1YER164W YIL067CP40514 678 aa3.3□□□□□ -1.88
CHD1YER164W YFR045WP43617 309 aa3.3□□□□□ -1.88
CHD1YER164W YJR115WP47152 169 aa3.3□□□□□ -1.88
CHD1YER164W BNA5Q05979 453 aa3.3□□□□□ -1.88
CHD1YER164W SEI1Q06058 285 aa3.3□□□□□ -1.88
CHD1YER164W RKI1Q12189 258 aa3.3□□□□□ -1.88
CHD1YER164W GCN1P33892 2672 aaKnown RBP3.3□□□□□ -1.88
CHD1YER164W MRS1P07266 363 aa3.3□□□□□ -1.88
CHD1YER164W BGL2P15703 313 aaKnown RBP3.3□□□□□ -1.88
CHD1YER164W RPI1P23250 407 aaKnown RBP3.3□□□□□ -1.88
CHD1YER164W GSP1P32835 219 aaKnown RBP3.3□□□□□ -1.88
CHD1YER164W PHD1P36093 366 aa3.3□□□□□ -1.88
CHD1YER164W HLR1Q04429 423 aa3.3□□□□□ -1.88
CHD1YER164W SET6Q12529 373 aa3.3□□□□□ -1.88
CHD1YER164W CDC36P06100 191 aaPredicted RBP3.3□□□□□ -1.88
CHD1YER164W RPL1AP0CX43 217 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 252.2 ms