RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 NFX1Q12986 1120 aaKnown RBP17.83■□□□□ 0.44
PHGDH-223ENST00000641597 SMTNL2Q2TAL5 461 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 LRRC71Q8N4P6 559 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 SLC7A3Q8WY07 619 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 SAMD15Q9P1V8 674 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 ADAMTS5Q9UNA0 930 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 AFG3L2Q9Y4W6 797 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 STYXL1Q9Y6J8 313 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 RGPD3A6NKT7 1758 aaPredicted RBP17.83■□□□□ 0.44
PHGDH-223ENST00000641597 RGPD4Q7Z3J3 1758 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 MAFGO15525 162 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 ASAP2O43150 1006 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 SNX3O60493 162 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 UBA1P22314 1058 aaKnown RBP17.83■□□□□ 0.44
PHGDH-223ENST00000641597 KLRC2P26717 231 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 NRLP54845 237 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 DYNLT1P63172 113 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 TREML2Q5T2D2 321 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 LIN9Q5TKA1 542 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 TAOK1Q7L7X3 1001 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 CEP120Q8N960 986 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 TRPM4Q8TD43 1214 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 PNMA3Q9UL41 463 aa17.83■□□□□ 0.44
PHGDH-223ENST00000641597 TPX2Q9ULW0 747 aaKnown RBP17.83■□□□□ 0.44
PHGDH-223ENST00000641597 ADGRA2Q96PE1 1338 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 DNAH12Q6ZR08 3092 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 UBOX5O94941 541 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 MYBL1P10243 752 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 TMED2Q15363 201 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 LACTB2Q53H82 288 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-223ENST00000641597 KCNT1Q5JUK3 1230 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 HIBCHQ6NVY1 386 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-223ENST00000641597 CATSPERGQ6ZRH7 1159 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 ARMC9Q7Z3E5 817 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 TBC1D1Q86TI0 1168 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-223ENST00000641597 ANKRD35Q8N283 1001 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-223ENST00000641597 FEZF2Q8TBJ5 459 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 PRPF31Q8WWY3 499 aaKnown RBP17.82■□□□□ 0.44
PHGDH-223ENST00000641597 SERPINB12Q96P63 405 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 PAIP2Q9BPZ3 127 aaKnown RBP17.82■□□□□ 0.44
PHGDH-223ENST00000641597 ACTR5Q9H9F9 607 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-223ENST00000641597 ZNF148Q9UQR1 794 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 KRT1P04264 644 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 RAP1GAPP47736 663 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 TGFB2P61812 414 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 CCNG2Q16589 344 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 GNPTABQ3T906 1256 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 CGB2Q6NT52 195 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 XRRA1Q6P2D8 792 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 FAM47EQ6ZV65 393 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 TRPM8Q7Z2W7 1104 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 KATNAL2Q8IYT4 538 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 WDTC1Q8N5D0 677 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 TRAPPC12Q8WVT3 735 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 CGRRF1Q99675 332 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 TMEM121Q9BTD3 319 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 ROPN1BQ9BZX4 212 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-223ENST00000641597 KDM4CQ9H3R0 1056 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 ROPN1Q9HAT0 212 aaPredicted RBP17.82■□□□□ 0.44
PHGDH-223ENST00000641597 SAYSD1Q9NPB0 183 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 TRIM33Q9UPN9 1127 aa17.82■□□□□ 0.44
PHGDH-223ENST00000641597 NFASCO94856 1347 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 CSDE1O75534 798 aaKnown RBP17.81■□□□□ 0.44
PHGDH-223ENST00000641597 IFNB1P01574 187 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 MMP8P22894 467 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 E2F5Q15329 346 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 LY6KQ17RY6 165 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 ZNF677Q86XU0 584 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 PHF13Q86YI8 300 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-223ENST00000641597 KIF2BQ8N4N8 673 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 ANKS4BQ8N8V4 417 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 TCP11Q8WWU5 503 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 SLITRK1Q96PX8 696 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 POC1B-GALNT4F8VUJ3 575 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 PSTPIP1O43586 416 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 GCAP28676 217 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 FOXN2P32314 431 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 NAMPTP43490 491 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 BPIFB4P59827 614 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 DALRD3Q5D0E6 543 aaKnown RBP17.81■□□□□ 0.44
PHGDH-223ENST00000641597 PARP9Q8IXQ6 854 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 FAM81BQ96LP2 452 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 RMDN2Q96LZ7 410 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 CCDC134Q9H6E4 229 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 HOMER3Q9NSC5 361 aa17.81■□□□□ 0.44
PHGDH-223ENST00000641597 DOCK1Q14185 1865 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 TMEM191CA6NGB0 347 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 LIASO43766 372 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 TMEM191BP0C7N4 346 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 PECAM1P16284 738 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-223ENST00000641597 MAGEA4P43358 317 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 ARSEP51690 589 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 KCNJ2P63252 427 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 GPS1Q13098 491 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 PLCB4Q15147 1175 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 STXBP2Q15833 593 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 WDR72Q3MJ13 1102 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 SYCP2LQ5T4T6 812 aa17.8■□□□□ 0.44
PHGDH-223ENST00000641597 GPAT2Q6NUI2 795 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms