RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 SMG8Q8ND04 991 aaKnown RBP14.04□□□□□ -0.16
PHGDH-221ENST00000641573 SLC30A5Q8TAD4 765 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 OLIG1Q8TAK6 271 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 LNX1Q8TBB1 728 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-221ENST00000641573 SLC20A1Q8WUM9 679 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 OSBPL7Q9BZF2 842 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 IRX2Q9BZI1 471 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-221ENST00000641573 TSGA10Q9BZW7 698 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 NIF3L1Q9GZT8 377 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 LACRTQ9GZZ8 138 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 XYLT2Q9H1B5 865 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 CXCL16Q9H2A7 254 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 RNF39Q9H2S5 420 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 HIPK3Q9H422 1215 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 AGO3Q9H9G7 860 aaKnown RBP14.04□□□□□ -0.16
PHGDH-221ENST00000641573 DPP3Q9NY33 737 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 CNTN3Q9P232 1028 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 TRIM10Q9UDY6 481 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 ITGA11Q9UKX5 1188 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 NENFQ9UMX5 172 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 PCDHA11Q9Y5I1 949 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 REV3LO60673 3130 aa14.04□□□□□ -0.16
PHGDH-221ENST00000641573 ZBBXA8MT70 800 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 PJA2O43164 708 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 KRT86O43790 486 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 POLR2BP30876 1174 aaKnown RBP14.03□□□□□ -0.16
PHGDH-221ENST00000641573 ATICP31939 592 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 RABGGTBP53611 331 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 RBP5P82980 135 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 PAK2Q13177 524 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 NAB2Q15742 525 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 NOP9Q86U38 636 aaKnown RBP14.03□□□□□ -0.16
PHGDH-221ENST00000641573 SLC47A2Q86VL8 602 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 GLYCTKQ8IVS8 523 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 RPUSD2Q8IZ73 545 aaKnown RBP14.03□□□□□ -0.16
PHGDH-221ENST00000641573 UBR7Q8N806 425 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 CXorf38Q8TB03 319 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 ZMAT2Q96NC0 199 aaKnown RBP14.03□□□□□ -0.16
PHGDH-221ENST00000641573 KLK14Q9P0G3 267 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 DNAI1Q9UI46 699 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 NAGPAQ9UK23 515 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 NOCTQ9UK39 431 aaKnown RBP14.03□□□□□ -0.16
PHGDH-221ENST00000641573 PADI3Q9ULW8 664 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 GUCA1BQ9UMX6 200 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 AGAP1Q9UPQ3 857 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 R3HCC1Q9Y3T6 440 aaKnown RBP14.03□□□□□ -0.16
PHGDH-221ENST00000641573 PCDHB4Q9Y5E5 795 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 PCDHB2Q9Y5E7 798 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 SQORQ9Y6N5 450 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 GBF1Q92538 1859 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 TRANK1O15050 2925 aa14.03□□□□□ -0.16
PHGDH-221ENST00000641573 FAM86C2PA6NEL3 165 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 CD4P01730 458 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 CKBP12277 381 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 CYP11B1P15538 503 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 ZSCAN20P17040 1043 aaPredicted RBP14.02□□□□□ -0.17
PHGDH-221ENST00000641573 CHRNB2P17787 502 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 PDE6CP51160 858 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 ZBTB6Q15916 424 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 XKR4Q5GH76 650 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 ZNF667Q5HYK9 610 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 ZNF569Q5MCW4 686 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 TAF3Q5VWG9 929 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 ALKBH5Q6P6C2 394 aaKnown RBP14.02□□□□□ -0.17
PHGDH-221ENST00000641573 TRAF7Q6Q0C0 670 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 HACE1Q8IYU2 909 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 BEST2Q8NFU1 509 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 KIF18AQ8NI77 898 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 EPS8L1Q8TE68 723 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 TSPAN18Q96SJ8 248 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 ACP6Q9NPH0 428 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 FAM105AQ9NUU6 356 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 SEPT11Q9NVA2 429 aaKnown RBP14.02□□□□□ -0.17
PHGDH-221ENST00000641573 MYO1AQ9UBC5 1043 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 NXF1Q9UBU9 619 aaKnown RBP14.02□□□□□ -0.17
PHGDH-221ENST00000641573 POLIQ9UNA4 740 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 CNTN6Q9UQ52 1028 aa14.02□□□□□ -0.17
PHGDH-221ENST00000641573 SMIM28A0A1B0GU29 152 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 ITGA4P13612 1032 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 MYOGP15173 224 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 KCNE1P15382 129 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 ATP2A2P16615 1042 aaKnown RBP14.01□□□□□ -0.17
PHGDH-221ENST00000641573 CASQ1P31415 396 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 ASPAP45381 313 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 BPIFB4P59827 614 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 YWHAEP62258 255 aaKnown RBP14.01□□□□□ -0.17
PHGDH-221ENST00000641573 CDR2Q01850 454 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 DSC3Q14574 896 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 GLRA4Q5JXX5 417 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 TMEM270Q6UE05 265 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 SCARA5Q6ZMJ2 495 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 RBBP8NLQ8NC74 664 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-221ENST00000641573 HLA-CQ95604 372 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 C18orf25Q96B23 403 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-221ENST00000641573 HPDLQ96IR7 371 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 FAXDC2Q96IV6 333 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 WDR24Q96S15 920 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 PACSIN1Q9BY11 444 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 VRTNQ9H8Y1 702 aa14.01□□□□□ -0.17
PHGDH-221ENST00000641573 RNF19AQ9NV58 838 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms