RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ATICP31939 592 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 SSTR3P32745 418 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-219ENST00000641513 RAP1GAPP47736 663 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 FMO1Q01740 532 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 WDR72Q3MJ13 1102 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 ZNF394Q53GI3 561 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 UBXN11Q5T124 520 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 PALB2Q86YC2 1186 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 TNS4Q8IZW8 715 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 EIF1ADQ8N9N8 165 aaKnown RBP9.45□□□□□ -0.9
PHGDH-219ENST00000641513 FAM71BQ8TC56 605 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.45□□□□□ -0.9
PHGDH-219ENST00000641513 C18orf25Q96B23 403 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-219ENST00000641513 PCDHB18PQ96TA0 734 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 SYT11Q9BT88 431 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 TRPV6Q9H1D0 765 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 PRDM10Q9NQV6 1147 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 CISHQ9NSE2 258 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 TAS2R14Q9NYV8 317 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 SALL4Q9UJQ4 1053 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 PTPN22Q9Y2R2 807 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 PCDHB2Q9Y5E7 798 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 CAPN6Q9Y6Q1 641 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 ANKRD62A6NC57 917 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 PALMO75781 387 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 CD19P15391 556 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 OAS2P29728 719 aaKnown RBP9.44□□□□□ -0.9
PHGDH-219ENST00000641513 CD52P31358 61 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 ASPAP45381 313 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 DNA2P51530 1060 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 CDH8P55286 799 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 VSNL1P62760 191 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 MGAT3Q09327 533 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 NNTQ13423 1086 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 CLEC16AQ2KHT3 1053 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 FBXO47Q5MNV8 452 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 ZNF618Q5T7W0 954 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 ZNF771Q7L3S4 317 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-219ENST00000641513 ZNF677Q86XU0 584 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 PASD1Q8IV76 773 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 NOA1Q8NC60 698 aaKnown RBP9.44□□□□□ -0.9
PHGDH-219ENST00000641513 RNF169Q8NCN4 708 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 CAGE1Q8TC20 777 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 ZNF653Q96CK0 615 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 CALR3Q96L12 384 aaKnown RBP9.44□□□□□ -0.9
PHGDH-219ENST00000641513 ZMAT2Q96NC0 199 aaKnown RBP9.44□□□□□ -0.9
PHGDH-219ENST00000641513 DEFB118Q96PH6 123 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 RPS6KC1Q96S38 1066 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 MMS19Q96T76 1030 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 THAP2Q9H0W7 228 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 RNF208Q9H0X6 261 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 XYLT2Q9H1B5 865 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 CXCL16Q9H2A7 254 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 SMYD3Q9H7B4 428 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 FAM105AQ9NUU6 356 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-219ENST00000641513 TUBGCP4Q9UGJ1 667 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 PADI3Q9ULW8 664 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 UBQLN1Q9UMX0 589 aaKnown RBP9.44□□□□□ -0.9
PHGDH-219ENST00000641513 NENFQ9UMX5 172 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 PCDHGC5Q9Y5F6 944 aa9.44□□□□□ -0.9
PHGDH-219ENST00000641513 TANC1Q9C0D5 1861 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 NCANO14594 1321 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 A0A0A6YYK5 440 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-219ENST00000641513 SMIM28A0A1B0GU29 152 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 TMEM110-MUSTN1A8MSY1 372 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 ARVCFO00192 962 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 NCK2O43639 380 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 FTCDO95954 541 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 CD4P01730 458 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 GZMAP12544 262 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 CCL5P13501 91 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 ATF7P17544 494 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-219ENST00000641513 BRD2P25440 801 aaKnown RBP9.43□□□□□ -0.9
PHGDH-219ENST00000641513 GPC5P78333 572 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 ORC1Q13415 861 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 LPIN1Q14693 890 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 CASP8Q14790 479 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 MTFR1Q15390 333 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 PTPROQ16827 1216 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 NAA35Q5VZE5 725 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 ACAD10Q6JQN1 1059 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 CHRDL2Q6WN34 429 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 TRIM72Q6ZMU5 477 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 DPH6Q7L8W6 267 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 RPAINQ86UA6 219 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 SMG8Q8ND04 991 aaKnown RBP9.43□□□□□ -0.9
PHGDH-219ENST00000641513 OLIG1Q8TAK6 271 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 SLC35G2Q8TBE7 412 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 CPA5Q8WXQ8 436 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 DDX1Q92499 740 aaKnown RBP9.43□□□□□ -0.9
PHGDH-219ENST00000641513 LPPQ93052 612 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 ARHGEF26Q96DR7 871 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 CAPZA3Q96KX2 299 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 ZNF560Q96MR9 790 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 ISCUQ9H1K1 167 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 AGO3Q9H9G7 860 aaKnown RBP9.43□□□□□ -0.9
PHGDH-219ENST00000641513 CYP3A43Q9HB55 503 aa9.43□□□□□ -0.9
PHGDH-219ENST00000641513 ERVK-5Q9HDB9 667 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms