RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 SV2CQ496J9 727 aa27.24■■□□□ 1.95
VEGFA-232ENST00000640653 CYP4A22Q5TCH4 519 aa27.24■■□□□ 1.95
VEGFA-232ENST00000640653 RESP18Q5W5W9 173 aa27.24■■□□□ 1.95
VEGFA-232ENST00000640653 CWF19L1Q69YN2 538 aaKnown RBP27.24■■□□□ 1.95
VEGFA-232ENST00000640653 PDZD4Q76G19 769 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-232ENST00000640653 ST13P5Q8NFI4 369 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-232ENST00000640653 NOC3LQ8WTT2 800 aaKnown RBP27.24■■□□□ 1.95
VEGFA-232ENST00000640653 CACTINQ8WUQ7 758 aaKnown RBP27.24■■□□□ 1.95
VEGFA-232ENST00000640653 PGLYRP2Q96PD5 576 aa27.24■■□□□ 1.95
VEGFA-232ENST00000640653 PCIF1Q9H4Z3 704 aa27.24■■□□□ 1.95
VEGFA-232ENST00000640653 CA14Q9ULX7 337 aa27.24■■□□□ 1.95
VEGFA-232ENST00000640653 CYB561D2O14569 222 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 EIF3DO15371 548 aaKnown RBP eCLIP27.23■■□□□ 1.95
VEGFA-232ENST00000640653 MICAL2O94851 1124 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 NPR3P17342 541 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 RFX1P22670 979 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 GPD1LQ8N335 351 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 LEMD2Q8NC56 503 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 ZSWIM2Q8NEG5 633 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 GPR152Q8TDT2 470 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 HPS3Q969F9 1004 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 MCRS1Q96EZ8 462 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 RTP3Q9BQQ7 232 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 RPP25Q9BUL9 199 aaKnown RBP27.23■■□□□ 1.95
VEGFA-232ENST00000640653 RCOR1Q9UKL0 485 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 YIPF1Q9Y548 306 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 DOCK6Q96HP0 2047 aa27.23■■□□□ 1.95
VEGFA-232ENST00000640653 GOLGA8IPA6NC78 632 aa27.22■■□□□ 1.95
VEGFA-232ENST00000640653 GOLGA8JA6NMD2 632 aa27.22■■□□□ 1.95
VEGFA-232ENST00000640653 GALR2O43603 387 aaPredicted RBP27.22■■□□□ 1.95
VEGFA-232ENST00000640653 CEBPBP17676 345 aa27.22■■□□□ 1.95
VEGFA-232ENST00000640653 AOC1P19801 751 aa27.22■■□□□ 1.95
VEGFA-232ENST00000640653 PNPLA4P41247 253 aa27.22■■□□□ 1.95
VEGFA-232ENST00000640653 PRSS36Q5K4E3 855 aa27.22■■□□□ 1.95
VEGFA-232ENST00000640653 FAM26FQ5R3K3 315 aa27.22■■□□□ 1.95
VEGFA-232ENST00000640653 UNC13DQ70J99 1090 aa27.22■■□□□ 1.95
VEGFA-232ENST00000640653 GLIS3Q8NEA6 775 aa27.22■■□□□ 1.95
VEGFA-232ENST00000640653 ASAH2Q9NR71 780 aa27.22■■□□□ 1.95
VEGFA-232ENST00000640653 WDFY4Q6ZS81 3184 aa27.21■■□□□ 1.95
VEGFA-232ENST00000640653 KRBA1A5PL33 1030 aa27.21■■□□□ 1.95
VEGFA-232ENST00000640653 STK25O00506 426 aa27.21■■□□□ 1.95
VEGFA-232ENST00000640653 VNN2O95498 520 aa27.21■■□□□ 1.95
VEGFA-232ENST00000640653 ALDH1A3P47895 512 aa27.21■■□□□ 1.95
VEGFA-232ENST00000640653 DUSP4Q13115 394 aa27.21■■□□□ 1.95
VEGFA-232ENST00000640653 THEM5Q8N1Q8 247 aa27.21■■□□□ 1.95
VEGFA-232ENST00000640653 CEP72Q9P209 647 aa27.21■■□□□ 1.95
VEGFA-232ENST00000640653 MUC6Q6W4X9 2439 aa27.21■■□□□ 1.95
VEGFA-232ENST00000640653 NOTCH4Q99466 2003 aa27.21■■□□□ 1.95
VEGFA-232ENST00000640653 MTMR11A4FU01 709 aa27.2■■□□□ 1.94
VEGFA-232ENST00000640653 KPNA7A9QM74 516 aa27.2■■□□□ 1.94
VEGFA-232ENST00000640653 WNT7BP56706 349 aa27.2■■□□□ 1.94
VEGFA-232ENST00000640653 CENPPQ6IPU0 288 aa27.2■■□□□ 1.94
VEGFA-232ENST00000640653 CEP57L1Q8IYX8 460 aa27.2■■□□□ 1.94
VEGFA-232ENST00000640653 TCEAL4Q96EI5 215 aa27.2■■□□□ 1.94
VEGFA-232ENST00000640653 KXD1Q9BQD3 176 aa27.2■■□□□ 1.94
VEGFA-232ENST00000640653 ARHGEF3Q9NR81 526 aa27.2■■□□□ 1.94
VEGFA-232ENST00000640653 ZDBF2Q9HCK1 2354 aa27.2■■□□□ 1.94
VEGFA-232ENST00000640653 UBE4BO95155 1302 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 ECI2O75521 394 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 ITGB3P05106 788 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 POLR2BP30876 1174 aaKnown RBP27.19■■□□□ 1.94
VEGFA-232ENST00000640653 EPHB3P54753 998 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 GPC5P78333 572 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 EPM2AIP1Q7L775 607 aaPredicted RBP27.19■■□□□ 1.94
VEGFA-232ENST00000640653 HS6ST3Q8IZP7 471 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 C1orf127Q8N9H9 656 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 OR10T2Q8NGX3 314 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 ZNF507Q8TCN5 953 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 BORCS6Q96GS4 357 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 TMEM209Q96SK2 561 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 KIAA1586Q9HCI6 787 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 HSFX1Q9UBD0 423 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 ITGA11Q9UKX5 1188 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 AGAP1Q9UPQ3 857 aa27.19■■□□□ 1.94
VEGFA-232ENST00000640653 ZNF233A6NK53 670 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 TMEM191BP0C7N4 346 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 MYL4P12829 197 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 EPHA5P54756 1037 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 SURF1Q15526 300 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 SLC39A12Q504Y0 691 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 WSCD1Q658N2 575 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 ALYREFQ86V81 257 aaKnown RBP27.18■■□□□ 1.94
VEGFA-232ENST00000640653 LRRC52Q8N7C0 313 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 ATAD1Q8NBU5 361 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 ZCWPW1Q9H0M4 648 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 BLZF1Q9H2G9 400 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 CRISPLD1Q9H336 500 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 TBC1D17Q9HA65 648 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 PDE11AQ9HCR9 933 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 HSPBP1Q9NZL4 362 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 SLC27A5Q9Y2P5 690 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 TSC2P49815 1807 aa27.18■■□□□ 1.94
VEGFA-232ENST00000640653 PVALEFA0A1B0GWK0 134 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 HOXD13P35453 343 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 CCR2P41597 374 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 AFMP43652 599 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 KRT85P78386 507 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 PFKPQ01813 784 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 EHHADHQ08426 723 aa27.17■■□□□ 1.94
VEGFA-232ENST00000640653 SMARCB1Q12824 385 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms