RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 PNPLA4P41247 253 aa28.76■■■□□ 2.19
VEGFA-231ENST00000640499 SV2CQ496J9 727 aa28.76■■■□□ 2.19
VEGFA-231ENST00000640499 WSCD1Q658N2 575 aa28.76■■■□□ 2.19
VEGFA-231ENST00000640499 TMC2Q8TDI7 906 aa28.76■■■□□ 2.19
VEGFA-231ENST00000640499 ZNF707Q96C28 371 aaPredicted RBP28.76■■■□□ 2.19
VEGFA-231ENST00000640499 ZNF560Q96MR9 790 aa28.76■■■□□ 2.19
VEGFA-231ENST00000640499 GTPBP4Q9BZE4 634 aaKnown RBP28.76■■■□□ 2.19
VEGFA-231ENST00000640499 PLEKHA4Q9H4M7 779 aa28.76■■■□□ 2.19
VEGFA-231ENST00000640499 SFXN1Q9H9B4 322 aa28.76■■■□□ 2.19
VEGFA-231ENST00000640499 CD320Q9NPF0 282 aa28.76■■■□□ 2.19
VEGFA-231ENST00000640499 TTC28Q96AY4 2481 aa28.76■■■□□ 2.19
VEGFA-231ENST00000640499 C2orf16Q68DN1 1984 aa28.75■■■□□ 2.19
VEGFA-231ENST00000640499 VNN2O95498 520 aa28.75■■■□□ 2.19
VEGFA-231ENST00000640499 ITIH3Q06033 890 aa28.75■■■□□ 2.19
VEGFA-231ENST00000640499 OVOS1Q6IE37 1185 aa28.75■■■□□ 2.19
VEGFA-231ENST00000640499 GPR149Q86SP6 731 aa28.75■■■□□ 2.19
VEGFA-231ENST00000640499 CMASQ8NFW8 434 aaPredicted RBP28.75■■■□□ 2.19
VEGFA-231ENST00000640499 ZNF461Q8TAF7 563 aa28.75■■■□□ 2.19
VEGFA-231ENST00000640499 TMEM209Q96SK2 561 aa28.75■■■□□ 2.19
VEGFA-231ENST00000640499 GDAP2Q9NXN4 497 aa28.75■■■□□ 2.19
VEGFA-231ENST00000640499 FRMD4BQ9Y2L6 1034 aa28.75■■■□□ 2.19
VEGFA-231ENST00000640499 OR4Q2P0C623 313 aa28.74■■■□□ 2.19
VEGFA-231ENST00000640499 ODC1P11926 461 aa28.74■■■□□ 2.19
VEGFA-231ENST00000640499 CCNE1P24864 410 aa28.74■■■□□ 2.19
VEGFA-231ENST00000640499 RPL13P26373 211 aaKnown RBP28.74■■■□□ 2.19
VEGFA-231ENST00000640499 ARPP19P56211 112 aa28.74■■■□□ 2.19
VEGFA-231ENST00000640499 BFSP1Q12934 665 aa28.74■■■□□ 2.19
VEGFA-231ENST00000640499 TDRD10Q5VZ19 366 aaKnown RBP28.74■■■□□ 2.19
VEGFA-231ENST00000640499 ZNF280DQ6N043 979 aa28.74■■■□□ 2.19
VEGFA-231ENST00000640499 LIMS2Q7Z4I7 341 aa28.74■■■□□ 2.19
VEGFA-231ENST00000640499 OR10T2Q8NGX3 314 aa28.74■■■□□ 2.19
VEGFA-231ENST00000640499 DHTKD1Q96HY7 919 aaPredicted RBP28.74■■■□□ 2.19
VEGFA-231ENST00000640499 HPDLQ96IR7 371 aa28.74■■■□□ 2.19
VEGFA-231ENST00000640499 L1RE1Q9UN81 338 aa28.74■■■□□ 2.19
VEGFA-231ENST00000640499 CCDC195A0A1B0GUA6 201 aa28.73■■■□□ 2.19
VEGFA-231ENST00000640499 ZMYND10O75800 440 aa28.73■■■□□ 2.19
VEGFA-231ENST00000640499 SEC24AO95486 1093 aa28.73■■■□□ 2.19
VEGFA-231ENST00000640499 VNN1O95497 513 aa28.73■■■□□ 2.19
VEGFA-231ENST00000640499 ZP2Q05996 745 aa28.73■■■□□ 2.19
VEGFA-231ENST00000640499 CBX2Q14781 532 aaPredicted RBP28.73■■■□□ 2.19
VEGFA-231ENST00000640499 FAM186BQ8IYM0 893 aa28.73■■■□□ 2.19
VEGFA-231ENST00000640499 PDCL2Q8N4E4 241 aa28.73■■■□□ 2.19
VEGFA-231ENST00000640499 UHRF1Q96T88 793 aaPredicted RBP28.73■■■□□ 2.19
VEGFA-231ENST00000640499 DUSP9Q99956 384 aaKnown RBP28.73■■■□□ 2.19
VEGFA-231ENST00000640499 PSMC2P35998 433 aaKnown RBP28.72■■■□□ 2.19
VEGFA-231ENST00000640499 TTI2Q6NXR4 508 aa28.72■■■□□ 2.19
VEGFA-231ENST00000640499 RNF19BQ6ZMZ0 732 aa28.72■■■□□ 2.19
VEGFA-231ENST00000640499 C15orf39Q6ZRI6 1047 aa28.72■■■□□ 2.19
VEGFA-231ENST00000640499 USP37Q86T82 979 aa28.72■■■□□ 2.19
VEGFA-231ENST00000640499 XYLT2Q9H1B5 865 aa28.72■■■□□ 2.19
VEGFA-231ENST00000640499 POMKQ9H5K3 350 aa28.72■■■□□ 2.19
VEGFA-231ENST00000640499 FAM50BQ9Y247 325 aa28.72■■■□□ 2.19
VEGFA-231ENST00000640499 SNX9Q9Y5X1 595 aa28.72■■■□□ 2.19
VEGFA-231ENST00000640499 DOCK6Q96HP0 2047 aa28.72■■■□□ 2.19
VEGFA-231ENST00000640499 C19orf67A6NJJ6 358 aa28.71■■■□□ 2.19
VEGFA-231ENST00000640499 ATF2P15336 505 aa28.71■■■□□ 2.19
VEGFA-231ENST00000640499 VAMP7P51809 220 aa28.71■■■□□ 2.19
VEGFA-231ENST00000640499 MYL6P60660 151 aa28.71■■■□□ 2.19
VEGFA-231ENST00000640499 SOWAHAQ2M3V2 549 aa28.71■■■□□ 2.19
VEGFA-231ENST00000640499 CES5AQ6NT32 575 aa28.71■■■□□ 2.19
VEGFA-231ENST00000640499 OSTM1Q86WC4 334 aa28.71■■■□□ 2.19
VEGFA-231ENST00000640499 ELMO3Q96BJ8 720 aa28.71■■■□□ 2.19
VEGFA-231ENST00000640499 DPP7Q9UHL4 492 aa28.71■■■□□ 2.19
VEGFA-231ENST00000640499 DSEQ9UL01 958 aa28.71■■■□□ 2.19
VEGFA-231ENST00000640499 OR6C75A6NL08 312 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 PSMA7O14818 248 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 IKBKBO14920 756 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 C8AP07357 584 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 TRIM49P0CI25 452 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 TRIM49CP0CI26 452 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 LRRC63Q05C16 580 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 PPP3CAQ08209 521 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 ZACNQ401N2 412 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 KLHL10Q6JEL2 608 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 SV2AQ7L0J3 742 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 ADHFE1Q8IWW8 467 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 TRIML1Q8N9V2 468 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 NELFBQ8WX92 580 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 MED15Q96RN5 788 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 MKNK1Q9BUB5 465 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 RHOBTB2Q9BYZ6 727 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 PRKD2Q9BZL6 878 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 CRISPLD1Q9H336 500 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 ZDHHC7Q9NXF8 308 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 PRKAG3Q9UGI9 489 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 MUC3AQ02505 3323 aa28.7■■■□□ 2.18
VEGFA-231ENST00000640499 CETN3O15182 167 aa28.69■■■□□ 2.18
VEGFA-231ENST00000640499 AP3M2P53677 418 aa28.69■■■□□ 2.18
VEGFA-231ENST00000640499 FKBP3Q00688 224 aaKnown RBP28.69■■■□□ 2.18
VEGFA-231ENST00000640499 ATAT1Q5SQI0 421 aa28.69■■■□□ 2.18
VEGFA-231ENST00000640499 TPGS2Q68CL5 300 aa28.69■■■□□ 2.18
VEGFA-231ENST00000640499 INTS8Q75QN2 995 aaKnown RBP28.69■■■□□ 2.18
VEGFA-231ENST00000640499 LRRTM3Q86VH5 581 aa28.69■■■□□ 2.18
VEGFA-231ENST00000640499 SLC7A14Q8TBB6 771 aa28.69■■■□□ 2.18
VEGFA-231ENST00000640499 PHF7Q9BWX1 381 aaPredicted RBP28.69■■■□□ 2.18
VEGFA-231ENST00000640499 OXCT2Q9BYC2 517 aaPredicted RBP28.69■■■□□ 2.18
VEGFA-231ENST00000640499 ZCWPW1Q9H0M4 648 aa28.69■■■□□ 2.18
VEGFA-231ENST00000640499 AFF4Q9UHB7 1163 aaKnown RBP28.69■■■□□ 2.18
VEGFA-231ENST00000640499 DENND4AQ7Z401 1863 aa28.68■■■□□ 2.18
VEGFA-231ENST00000640499 NCOR1O75376 2440 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms