RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 SBK1Q52WX2 424 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 EOGTQ5NDL2 527 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 G2E3Q7L622 706 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 C8orf58Q8NAV2 365 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 CADM4Q8NFZ8 388 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 OR2I1PQ8NGU4 316 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 ZNF775Q96BV0 537 aaPredicted RBP3.97□□□□□ -1.77
CCDC7-213ENST00000639290 ARSGQ96EG1 525 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 C5orf34Q96MH7 638 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 SENP7Q9BQF6 1050 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 SLC6A16Q9GZN6 736 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 UBN1Q9NPG3 1134 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 COPRSQ9NQ92 184 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 PCDHGA7Q9Y5G6 932 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 CCL16O15467 120 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 S1PR4O95977 384 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 ACP1P24666 158 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 PPP2R2AP63151 447 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 CRY1Q16526 586 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 GNPTABQ3T906 1256 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 SP5Q6BEB4 398 aaPredicted RBP3.97□□□□□ -1.77
CCDC7-213ENST00000639290 CATIPQ7Z7H3 387 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 FAM228AQ86W67 206 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 DCAF4Q8WV16 495 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 TMEM158Q8WZ71 300 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 NAF1Q96HR8 494 aaKnown RBP3.97□□□□□ -1.77
CCDC7-213ENST00000639290 FOXC2Q99958 501 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 COLEC11Q9BWP8 271 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 B3GNT4Q9C0J1 378 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 SMARCAD1Q9H4L7 1026 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 DCP1AQ9NPI6 582 aaPredicted RBP3.97□□□□□ -1.77
CCDC7-213ENST00000639290 SEPT10Q9P0V9 454 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 GMIPQ9P107 970 aa3.97□□□□□ -1.77
CCDC7-213ENST00000639290 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.97□□□□□ -1.77
CCDC7-213ENST00000639290 FNDC3AQ9Y2H6 1198 aaKnown RBP3.97□□□□□ -1.77
CCDC7-213ENST00000639290 RPH3AQ9Y2J0 694 aaPredicted RBP3.97□□□□□ -1.77
CCDC7-213ENST00000639290 ZBED9Q6R2W3 1325 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 EGFP01133 1207 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 HOXC13P31276 330 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 SOX9P48436 509 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 POLE2P56282 527 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 PRR20EP86478 221 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 PRR20CP86479 221 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 PRR20DP86480 221 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 PRR20BP86481 221 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 PRR20AP86496 221 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 TNK2Q07912 1038 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 CLCA4Q14CN2 919 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 TEAD4Q15561 434 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 LACTB2Q53H82 288 aaPredicted RBP3.96□□□□□ -1.77
CCDC7-213ENST00000639290 CYP4A22Q5TCH4 519 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 ARMCX6Q7L4S7 300 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 PTRH1Q86Y79 214 aaKnown RBP3.96□□□□□ -1.77
CCDC7-213ENST00000639290 STK32AQ8WU08 396 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 CNDP2Q96KP4 475 aaKnown RBP3.96□□□□□ -1.77
CCDC7-213ENST00000639290 PNMA5Q96PV4 448 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 FAM193BQ96PV7 902 aaPredicted RBP3.96□□□□□ -1.77
CCDC7-213ENST00000639290 TPSD1Q9BZJ3 242 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 FSCN3Q9NQT6 498 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 ATMQ13315 3056 aa3.96□□□□□ -1.77
CCDC7-213ENST00000639290 ZNF106Q9H2Y7 1883 aaKnown RBP3.96□□□□□ -1.78
CCDC7-213ENST00000639290 MAGEB6P1A0A0J9YX57 407 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 MTSS1O43312 755 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 RECKO95980 971 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 NR3C2P08235 984 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 HSPD1P10809 573 aaKnown RBP3.96□□□□□ -1.78
CCDC7-213ENST00000639290 CD46P15529 392 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 NR1D1P20393 614 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 SLC1A4P43007 532 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 SLC26A2P50443 739 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 INSM1Q01101 510 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-213ENST00000639290 SLC5A9Q2M3M2 681 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 C14orf28Q4W4Y0 310 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 PDLIM3Q53GG5 364 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-213ENST00000639290 EMC10Q5UCC4 262 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 ANO7Q6IWH7 933 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 PDZD4Q76G19 769 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-213ENST00000639290 PALB2Q86YC2 1186 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 ARL14Q8N4G2 192 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 KIAA1958Q8N8K9 716 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 RDH13Q8NBN7 331 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 SYTL5Q8TDW5 730 aaPredicted RBP3.96□□□□□ -1.78
CCDC7-213ENST00000639290 ING5Q8WYH8 240 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 SLC46A1Q96NT5 459 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 MARCH5Q9NX47 278 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 NOVA2Q9UNW9 492 aaKnown RBP3.96□□□□□ -1.78
CCDC7-213ENST00000639290 JMJD1CQ15652 2540 aa3.96□□□□□ -1.78
CCDC7-213ENST00000639290 SPENQ96T58 3664 aaKnown RBP3.96□□□□□ -1.78
CCDC7-213ENST00000639290 NRP1O14786 923 aa3.95□□□□□ -1.78
CCDC7-213ENST00000639290 BCAR3O75815 825 aa3.95□□□□□ -1.78
CCDC7-213ENST00000639290 DGAT1O75907 488 aa3.95□□□□□ -1.78
CCDC7-213ENST00000639290 UQCRFS1P47985 274 aa3.95□□□□□ -1.78
CCDC7-213ENST00000639290 RUNX1T1Q06455 604 aa3.95□□□□□ -1.78
CCDC7-213ENST00000639290 ELAVL2Q12926 359 aaKnown RBP3.95□□□□□ -1.78
CCDC7-213ENST00000639290 IKQ13123 557 aaPredicted RBP3.95□□□□□ -1.78
CCDC7-213ENST00000639290 PDGFRLQ15198 375 aa3.95□□□□□ -1.78
CCDC7-213ENST00000639290 ARHGEF16Q5VV41 709 aa3.95□□□□□ -1.78
CCDC7-213ENST00000639290 GIMAP6Q6P9H5 292 aa3.95□□□□□ -1.78
CCDC7-213ENST00000639290 TRMT11Q7Z4G4 463 aaKnown RBP3.95□□□□□ -1.78
CCDC7-213ENST00000639290 ELMOD1Q8N336 334 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms