RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 SMYD3Q9H7B4 428 aa7.5□□□□□ -1.21
NECAP1-213ENST00000638883 DMTF1Q9Y222 760 aa7.5□□□□□ -1.21
NECAP1-213ENST00000638883 COL4A4P53420 1690 aaPredicted RBP7.5□□□□□ -1.21
NECAP1-213ENST00000638883 A0A1W2PQJ5 194 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 hCG_1642624A0A1W2PR95 340 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 A8MXQ7 604 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 USP1O94782 785 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 TPPPO94811 219 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ESRRBO95718 433 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 CCNE1P24864 410 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 TOB1P50616 345 aaPredicted RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 NUP107P57740 925 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 CLDN10P78369 228 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 PLCB3Q01970 1234 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 CNGA3Q16281 694 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 NDUFA5Q16718 116 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 WDR78Q5VTH9 848 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ARHGAP27Q6ZUM4 889 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 NLRP10Q86W26 655 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 PASD1Q8IV76 773 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ADSSL1Q8N142 457 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ACTRT1Q8TDG2 376 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 SNX29Q8TEQ0 813 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 CCDC138Q96M89 665 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 LSM14BQ9BX40 385 aaKnown RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 CADM1Q9BY67 442 aaKnown RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 TRIM55Q9BYV6 548 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ROPN1BQ9BZX4 212 aaPredicted RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ROPN1Q9HAT0 212 aaPredicted RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 PCDH11YQ9BZA8 1340 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 A0A087X0B3 334 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ERVV-2B6SEH9 535 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 POC1B-GALNT4F8VUJ3 575 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 H3BRJ5 948 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 XPO1O14980 1071 aaKnown RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 GSC2O15499 205 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ECE2O60344 883 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 CREB1P16220 341 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ACADVLP49748 655 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 MXI1P50539 228 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 YARSP54577 528 aaKnown RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 RALGDSQ12967 914 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 CDC16Q13042 620 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 LRP8Q14114 963 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 PKN1Q16512 942 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 LPCAT2Q7L5N7 544 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 PAF1Q8N7H5 531 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 VGLL2Q8N8G2 317 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ZNF507Q8TCN5 953 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 DDI1Q8WTU0 396 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ZFRQ96KR1 1074 aaKnown RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 TUT1Q9H6E5 874 aaKnown RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 HEY2Q9UBP5 337 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 MROH7Q68CQ1 1323 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 SSU72P8A0A1W2PR75 194 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 FAM47DPA6NHR8 397 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 PJA2O43164 708 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 STARD3NLO95772 234 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 H2AFZP0C0S5 128 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 KRT10P13645 584 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 GUCY1A2P33402 732 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 PHKA1P46020 1223 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 STAT2P52630 851 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 EPHB1P54762 984 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 BASP1P80723 227 aaKnown RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 KDSRQ06136 332 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 ZNF211Q13398 564 aaPredicted RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 KIF6Q6ZMV9 814 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 H2AFVQ71UI9 128 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 NPAS4Q8IUM7 802 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 CNBD2Q96M20 576 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 SLC7A5P2Q9GIP4 190 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 C10orf88Q9H8K7 445 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 LRRC4CQ9HCJ2 640 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 SLCO1B3Q9NPD5 702 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 HACD3Q9P035 362 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 CNOT7Q9UIV1 285 aaKnown RBP7.49□□□□□ -1.21
NECAP1-213ENST00000638883 GIT1Q9Y2X7 761 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 C10orf71Q711Q0 1435 aa7.49□□□□□ -1.21
NECAP1-213ENST00000638883 SH3PXD2BA1X283 911 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 FAM187AA6NFU0 413 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 SERPINB7O75635 380 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 VCLP18206 1134 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 LMNB1P20700 586 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 TCF7P36402 384 aaPredicted RBP7.48□□□□□ -1.21
NECAP1-213ENST00000638883 TXKP42681 527 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 PMS1P54277 932 aaKnown RBP7.48□□□□□ -1.21
NECAP1-213ENST00000638883 AMPD3Q01432 767 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 MAN2A1Q16706 1144 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 EXOC3L4Q17RC7 722 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 CTC1Q2NKJ3 1217 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 UNC13DQ70J99 1090 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 JAMLQ86YT9 394 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 FBXL16Q8N461 479 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 SCFD2Q8WU76 684 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 CCDC124Q96CT7 223 aaKnown RBP7.48□□□□□ -1.21
NECAP1-213ENST00000638883 TMEM87BQ96K49 555 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 RILPQ96NA2 401 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 GCNAQ96QF7 691 aa7.48□□□□□ -1.21
NECAP1-213ENST00000638883 ZKSCAN3Q9BRR0 538 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms