RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 ARMC3Q5W041 872 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 RCSD1Q6JBY9 416 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 SPATA2LQ8IUW3 424 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 TASP1Q9H6P5 420 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 SOAT2O75908 522 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 GUCY1A2P33402 732 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 CSE1LP55060 971 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 NFRKBQ6P4R8 1299 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 STK33Q9BYT3 514 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 PDE9AO76083 593 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 PLOD1Q02809 727 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 PTRHD1Q6GMV3 140 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 NT5DC4Q86YG4 428 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 SPATA4Q8NEY3 305 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 PIGOQ8TEQ8 1089 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 MAGED4Q96JG8 741 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 RBM15Q96T37 977 aaKnown RBP eCLIP18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 GOLPH3Q9H4A6 298 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 MLXIPLQ9NP71 852 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 KRT73Q86Y46 540 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 PACSIN1Q9BY11 444 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 ADAMTS12P58397 1594 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 TM9SF1O15321 606 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 CAND2O75155 1236 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 IL18RAPO95256 599 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 SLC2A3P11169 496 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 SLC16A1P53985 500 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 TGM3Q08188 693 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 CTTNQ14247 550 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 AGAP9Q5VTM2 703 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 ADCK2Q7Z695 626 aa18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 RNF25Q96BH1 459 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-247ENST00000637769 POU4F1Q01851 419 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 CCT8L2Q96SF2 557 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 CEP44Q9C0F1 390 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 PCDHB6Q9Y5E3 794 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 CYP2D7A0A087X1C5 515 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 CD4P01730 458 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 TRIP10Q15642 601 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 TMEM154Q6P9G4 183 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 DDX53Q86TM3 631 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 EDC3Q96F86 508 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 RGS18Q9NS28 235 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 KCNB1Q14721 858 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 KATNAL1Q9BW62 490 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 PSMC3P17980 439 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 PIK3R1P27986 724 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 CENPAP49450 140 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 LONP2Q86WA8 852 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 THNSL1Q8IYQ7 743 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 ZNF507Q8TCN5 953 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 RAD21L1Q9H4I0 556 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 HNMTP50135 292 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 RSAD1Q9HA92 442 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 AGO2Q9UKV8 859 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 KCNA6P17658 529 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 TWF1Q12792 350 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 YIPF2Q9BWQ6 316 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 FYNP06241 537 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 SNRPAP09012 282 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 HOXA13P31271 388 aaPredicted RBP18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 TGFBR2P37173 567 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 TAF2Q6P1X5 1199 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 COQ7Q99807 217 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 SIK2Q9H0K1 926 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 SERHL2Q9H4I8 314 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 SERHLQ9NQF3 203 aa18.81■□□□□ 0.6
CACNA1A-247ENST00000637769 DARSP14868 501 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 GRK3P35626 688 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 CRKLP46109 303 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 DALRD3Q5D0E6 543 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 AHI1Q8N157 1196 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 C2orf69Q8N8R5 385 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 IARS2Q9NSE4 1012 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 PCSK1NQ9UHG2 260 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 EIF3LQ9Y262 564 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 PSMD14O00487 310 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 SLC16A2P36021 539 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 ZNF394Q53GI3 561 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 FAM196AQ6ZSG2 479 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 NAT9Q9BTE0 207 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 A8MXQ7 604 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 ZW10O43264 779 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 P4HBP07237 508 aaKnown RBP18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 CPB1P15086 417 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 ARHGEF5Q12774 1597 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 FCER1AP12319 257 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 PMF1Q6P1K2 205 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 PCDHA6Q9UN73 950 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 PCDHA8Q9Y5H6 950 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 ITGAXP20702 1163 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 MAGEA10P43363 369 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 ZNF677Q86XU0 584 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 NSL1Q96IY1 281 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 JPH1Q9HDC5 661 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 BSDC1Q9NW68 430 aaPredicted RBP18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 COBLL1Q53SF7 1204 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 FLCNQ8NFG4 579 aa18.8■□□□□ 0.6
CACNA1A-247ENST00000637769 PHACTR1Q9C0D0 580 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms