RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PROZP22891 400 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 MARK3P27448 753 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 TNFSF9P41273 254 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 SSR1P43307 286 aaKnown RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 MAGEA9P43362 315 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 COPS2P61201 443 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 DRP2Q13474 957 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 PIGHQ14442 188 aaPredicted RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 KYAT1Q16773 422 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 SKIDA1Q1XH10 827 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 ZNF699Q32M78 642 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 HSDL1Q3SXM5 330 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 ZNF568Q3ZCX4 644 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 SEZ6Q53EL9 994 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 ZNF484Q5JVG2 852 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 ATF7IP2Q5U623 682 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 DNAJC24Q6P3W2 148 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 ZNF473Q8WTR7 871 aaKnown RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 CCDC114Q96M63 670 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 CCT8L2Q96SF2 557 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 MTMR12Q9C0I1 747 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 CISHQ9NSE2 258 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 PRMT7Q9NVM4 692 aaPredicted RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 DDX56Q9NY93 547 aaKnown RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 FAM169AQ9Y6X4 670 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 PAPPA2Q9BXP8 1791 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 CAND2O75155 1236 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 ARIH2O95376 493 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 TXNP10599 105 aaKnown RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 CDH5P33151 784 aaPredicted RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 MYL6P60660 151 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 TFAMQ00059 246 aaKnown RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 KLF1Q13351 362 aaPredicted RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 SNX1Q13596 522 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 Q3C1V9 767 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 DCUN1D2Q6PH85 259 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 MYCBPAPQ8TBZ2 947 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 ZC3H15Q8WU90 426 aaKnown RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 PPM1EQ8WY54 764 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 TRIM7Q9C029 511 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 EPB41L4BQ9H329 900 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 SEMA4AQ9H3S1 761 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 RPF1Q9H9Y2 349 aaKnown RBP12.86□□□□□ -0.35
CLN8-212ENST00000637083 ERAP1Q9NZ08 941 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 RBPJLQ9UBG7 517 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 TNFSF13BQ9Y275 285 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 USTQ9Y2C2 406 aa12.86□□□□□ -0.35
CLN8-212ENST00000637083 LRRC37A2A6NM11 1700 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 TMEM191CA6NGB0 347 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 INO80B-WBP1J3KQ70 363 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 RASGRF2O14827 1237 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 MAGEB2O15479 319 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 TRAPPC3O43617 180 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 TJP3O95049 919 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 PGK2P07205 417 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 RALAP11233 206 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 ADCY8P40145 1251 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 PHKA2P46019 1235 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 ZFYVE27Q5T4F4 411 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 EFCAB12Q6NXP0 572 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 CCDC62Q6P9F0 684 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 PHLDB2Q86SQ0 1253 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 ERICH1Q86X53 443 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 LRRC71Q8N4P6 559 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 INO80BQ9C086 356 aaPredicted RBP12.85□□□□□ -0.35
CLN8-212ENST00000637083 PTPRHQ9HD43 1115 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 TXNRD2Q9NNW7 524 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 PPANQ9NQ55 473 aaKnown RBP12.85□□□□□ -0.35
CLN8-212ENST00000637083 CHST7Q9NS84 486 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 ANAPC5Q9UJX4 755 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 PNMA3Q9UL41 463 aa12.85□□□□□ -0.35
CLN8-212ENST00000637083 TLDC2A0PJX2 215 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 ABLIM1O14639 778 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 CFHP08603 1231 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 HOXC6P09630 235 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 CD58P19256 250 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 CCNA1P78396 465 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 LACTBP83111 547 aaPredicted RBP12.84□□□□□ -0.35
CLN8-212ENST00000637083 LAMC2Q13753 1193 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 USP50Q70EL3 339 aaPredicted RBP12.84□□□□□ -0.35
CLN8-212ENST00000637083 YTHDF3Q7Z739 585 aaKnown RBP12.84□□□□□ -0.35
CLN8-212ENST00000637083 CCDC25Q86WR0 208 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 C10orf67Q8IYJ2 551 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 THNSL1Q8IYQ7 743 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 CDCA5Q96FF9 252 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 NLRP4Q96MN2 994 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 WDR35Q9P2L0 1181 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 OTOFQ9HC10 1997 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 ZBTB42B2RXF5 422 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 SHBGP04278 402 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 P4HA1P13674 534 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 ATICP31939 592 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 PTPN7P35236 360 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 TAS2R40P59535 323 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 NFX1Q12986 1120 aaKnown RBP12.84□□□□□ -0.35
CLN8-212ENST00000637083 MOGSQ13724 837 aa12.84□□□□□ -0.35
CLN8-212ENST00000637083 FAM187BQ17R55 369 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms