RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 TUBGCP2Q9BSJ2 902 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 OSBPL7Q9BZF2 842 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 IMPG2Q9BZV3 1241 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 GZF1Q9H116 711 aaPredicted RBP7.25□□□□□ -1.25
UPF3B-205ENST00000636792 PRO3102Q9H379 93 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 PCIF1Q9H4Z3 704 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 CBX8Q9HC52 389 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 RNF19AQ9NV58 838 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 INTS13Q9NVM9 706 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 USP20Q9Y2K6 914 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 COQ4Q9Y3A0 265 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 R3HCC1Q9Y3T6 440 aaKnown RBP7.25□□□□□ -1.25
UPF3B-205ENST00000636792 PCDHA11Q9Y5I1 949 aa7.25□□□□□ -1.25
UPF3B-205ENST00000636792 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 ANO9A1A5B4 782 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 LRRIQ3A6PVS8 624 aaPredicted RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 LACTBL1A8MY62 500 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 H0YGN5 161 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 PTGESO14684 152 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 TRAPPC3O43617 180 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 AFPP02771 609 aaKnown RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 ACRP10323 421 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 P4HA1P13674 534 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 TNNI1P19237 187 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 EPHB4P54760 987 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 DEFB103AP81534 67 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 UBE3AQ05086 875 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 RNASELQ05823 741 aaKnown RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 NAB2Q15742 525 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 TCTN1Q2MV58 587 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 LRIT3Q3SXY7 679 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 SV2CQ496J9 727 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 DCAF17Q5H9S7 520 aaPredicted RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 TCERG1LQ5VWI1 586 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 JADE1Q6IE81 842 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 DPH6Q7L8W6 267 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 CDR2LQ86X02 465 aaPredicted RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 IRF2BP1Q8IU81 584 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 EFCAB13Q8IY85 973 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 BEND7Q8N7W2 519 aaPredicted RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 GALNT6Q8NCL4 622 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 CCDC150Q8NCX0 1101 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 GSTCDQ8NEC7 633 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 HELQQ8TDG4 1101 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 JAKMIP2Q96AA8 810 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 CASD1Q96PB1 797 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 FAM193BQ96PV7 902 aaPredicted RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 KCTD15Q96SI1 283 aaPredicted RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 GAD1Q99259 594 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 SPOCK3Q9BQ16 436 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 PLVAPQ9BX97 442 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 OXCT2Q9BYC2 517 aaPredicted RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 DNAI2Q9GZS0 605 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 NDST4Q9H3R1 872 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 PDE11AQ9HCR9 933 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 SAMSN1Q9NSI8 373 aaKnown RBP7.24□□□□□ -1.25
UPF3B-205ENST00000636792 TBC1D13Q9NVG8 400 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 FANCLQ9NW38 375 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 HES2Q9Y543 173 aa7.24□□□□□ -1.25
UPF3B-205ENST00000636792 SCN1AP35498 2009 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 A0A1W2PQC6 194 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 FSD2A1L4K1 749 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 GOLGA8IPA6NC78 632 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 GOLGA8JA6NMD2 632 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 TBKBP1A7MCY6 615 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 LGALS16A8MUM7 142 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 C5orf67F2Z3F1 127 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 C4BPAP04003 597 aaKnown RBP7.23□□□□□ -1.25
UPF3B-205ENST00000636792 RB1P06400 928 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 NFICP08651 508 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 DLATP10515 647 aaKnown RBP7.23□□□□□ -1.25
UPF3B-205ENST00000636792 FGFR1P11362 822 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 TRIM21P19474 475 aaKnown RBP7.23□□□□□ -1.25
UPF3B-205ENST00000636792 CDK11BP21127 795 aaKnown RBP7.23□□□□□ -1.25
UPF3B-205ENST00000636792 TBXAS1P24557 533 aaPredicted RBP7.23□□□□□ -1.25
UPF3B-205ENST00000636792 AKAP5P24588 427 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 FMO5P49326 533 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 ALDH7A1P49419 539 aaKnown RBP7.23□□□□□ -1.25
UPF3B-205ENST00000636792 AARSP49588 968 aaKnown RBP eCLIP7.23□□□□□ -1.25
UPF3B-205ENST00000636792 TAF6P49848 677 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 SCNN1GP51170 649 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 OSTNP61366 133 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 RBP5P82980 135 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 MYL7Q01449 175 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 MYO1EQ12965 1108 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 BTG3Q14201 252 aaPredicted RBP7.23□□□□□ -1.25
UPF3B-205ENST00000636792 ZBTB41Q5SVQ8 909 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 PDXDC1Q6P996 788 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 GBP6Q6ZN66 633 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 ENOSF1Q7L5Y1 443 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 TRAPPC11Q7Z392 1133 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 LUZP1Q86V48 1076 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 TMEM192Q8IY95 271 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 COLGALT2Q8IYK4 626 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 FIBCD1Q8N539 461 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 C1orf127Q8N9H9 656 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 RNF169Q8NCN4 708 aa7.23□□□□□ -1.25
UPF3B-205ENST00000636792 FBXL13Q8NEE6 735 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms