RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 EFCAB13Q8IY85 973 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 IQUBQ8NA54 791 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 KCNG4Q8TDN1 519 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 PHOX2BQ99453 314 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 PYM1Q9BRP8 204 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 TMEM206Q9H813 350 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 ASAH2Q9NR71 780 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 RBAKQ9NYW8 714 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 CEP72Q9P209 647 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 DSEQ9UL01 958 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 PIEZO1Q92508 2521 aa16.23■□□□□ 0.19
CACNA1A-230ENST00000636768 GOLGA8IPA6NC78 632 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 GOLGA8JA6NMD2 632 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 MYL4P12829 197 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 GARTP22102 1010 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 GPR17Q13304 367 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 PRSS36Q5K4E3 855 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 BRSK2Q8IWQ3 736 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 LEMD2Q8NC56 503 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 TCEAL4Q96EI5 215 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 ZNF560Q96MR9 790 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 CBWD1Q9BRT8 395 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 TRIM9Q9C026 710 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 PCIF1Q9H4Z3 704 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 KBTBD4Q9NVX7 518 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 GTF3C3Q9Y5Q9 886 aa16.22■□□□□ 0.19
CACNA1A-230ENST00000636768 MTMR11A4FU01 709 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 CYB561D2O14569 222 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 EXTL3O43909 919 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 ECI2O75521 394 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 MICAL2O94851 1124 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 VNN2O95498 520 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 CYP11A1P05108 521 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 ALDH1A3P47895 512 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 EPHB3P54753 998 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 PFKPQ01813 784 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 DUSP4Q13115 394 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 SV2CQ496J9 727 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 CCDC105Q8IYK2 499 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 HS6ST3Q8IZP7 471 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 ZSWIM2Q8NEG5 633 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 CACTINQ8WUQ7 758 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 SHDQ96IW2 340 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 TMEM209Q96SK2 561 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 FAM13BQ9NYF5 915 aa16.21■□□□□ 0.19
CACNA1A-230ENST00000636768 PDCD11Q14690 1871 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 DOCK8Q8NF50 2099 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 POLR2DO15514 142 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 PNPLA4P41247 253 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 CCR2P41597 374 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 WNT7BP56706 349 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 SNW1Q13573 536 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 PKP1Q13835 747 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 SLC39A12Q504Y0 691 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 ATL3Q6DD88 541 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 CENPPQ6IPU0 288 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 PHLDB3Q6NSJ2 640 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 THEM5Q8N1Q8 247 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 DTWD2Q8NBA8 298 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 ATAD1Q8NBU5 361 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 GLIS3Q8NEA6 775 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 OR10T2Q8NGX3 314 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 HPS3Q969F9 1004 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 CRISPLD1Q9H336 500 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 SLITRK6Q9H5Y7 841 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 MAGEF1Q9HAY2 307 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 CFAP45Q9UL16 551 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 SLC27A5Q9Y2P5 690 aa16.2■□□□□ 0.18
CACNA1A-230ENST00000636768 KPNA7A9QM74 516 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 KIAA0391O15091 583 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 ITGB3P05106 788 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 GJA1P17302 382 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 POLR2BP30876 1174 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 DNM1Q05193 864 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 FAM78AQ5JUQ0 283 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 FAM26FQ5R3K3 315 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 WSCD1Q658N2 575 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 TANGO2Q6ICL3 276 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 GPD1LQ8N335 351 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 TTC9BQ8N6N2 239 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 ELSPBP1Q96BH3 223 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 SEPT5Q99719 369 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 ZFP14Q9HCL3 533 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 PDE11AQ9HCR9 933 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 PCDHA7Q9UN72 937 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 AGAP1Q9UPQ3 857 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 SIT1Q9Y3P8 196 aa16.19■□□□□ 0.18
CACNA1A-230ENST00000636768 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 EIF3DO15371 548 aaKnown RBP eCLIP16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 SOAT2O75908 522 aa16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 KRT19P08727 400 aa16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 TMEM191BP0C7N4 346 aa16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 CDR1P51861 262 aa16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 EPHA5P54756 1037 aa16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 BFSP1Q12934 665 aa16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 ANGPT1Q15389 498 aa16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 TEAD2Q15562 447 aa16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 MLF2Q15773 248 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 SLC44A4Q53GD3 710 aa16.18■□□□□ 0.18
CACNA1A-230ENST00000636768 CNNM4Q6P4Q7 775 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms